Gene PICST_64253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_64253 
Symbol 
ID4841031 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp32653 
End bp33825 
Gene Length1173 bp 
Protein Length385 aa 
Translation table12 
GC content39% 
IMG OID640392346 
Productpredicted protein 
Protein accessionXP_001386407 
Protein GI150866722 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTTAAGAAAG CAAATGTGGA TCCAACTGTA GGAGCAAAGT TCATCCAGGT ATCAAAATTG 
GTGAAACGGT TCAAACCTGT GACAGTAAAC GGTGTAGCTA CCAAGTCTAT TTTGGAGCAG
GTCAAGCAAA AAGAACAGAA TGAACCGGAC TATTTCAAAT CACAATACAA GAACAGTGAA
AGGCTATCGT ATCTCCAAAA GTACTTGCTA GAGTTCAATC AAGTTCAACC CCAGGCGCTG
TTATACGTCT CTTTTGTATT GAGACCTTCC GATCCAGAAT TTCCTTTTGA CATGGAAAAG
TTGAAGTTGA ACATGACTGT ACCACCAACT TTCCCTGTTG ATAGGGCAGC CCGGCCTAGC
ATAGTTGTTT TGAACGAAGA GATTCCCCGA GGTTTTGCTG CCAATATCGA GATCGGGTTT
AGAAGAATAG CGGATTTAGC CAGAAGTACT TTGAAGGACG AAGAAATTGA ACTTGTACTG
GGCTCCGGTT TACTTTCTAT GGTTCTAACC TTGGACAAGT ACCTTGAGGT ATTCTTGAAA
CAGGAAAAGC GAGAAACAAT TAAATTTGTC AAGACCTTGA AGAAACCTGT CGAGCAGATA
AAGCCTGCAA GTCCAAAGCC CGAGCAAATT GGTGATATCA AGATTGAACA ACAACCGGAG
TACAACAATA TATTGAAAGA AGTGATTGAA AGAAGAAATC AAATTTTAGA GGAAATGACC
AGCAAAATAG GGGAAAAGAA TGTCAGAGTT TTCAAGAGAT CGAAGCAGGA GACACTCATA
AAGGTCAATA TTCCAATAGT CAAAGGATCT AATTTCTCAA AGATCCCAGC TTATTGGATT
AAGAATAACT TTGTCGAAGT GATGCTATCG GTTCCTATTG ATTATCCTGG ACTGCCAGTT
TTGTTTACAA TCGCAAATAA TTTCAGCACC AATTTGATTG TTAAGTATGG TAAAGATGTC
GAAGAACAAA TCAACTTGGT CAAGCTCACA AGAGAATATA GACAAGTAGA AAAGGATTTC
GGAAAGAACA CCAAGAGATT CGAATTCGGA GATTCCAGCC TTATTCAAAA GTTGAATTGG
CTCACGAATA ATCTCGGCAC TTTCTGTCTT GAACCTGAGC AATTCCAGAC TTGGAACGAC
AATGTGGACA AGTTGCAGAA ACAAATTGTT TGA
 
Protein sequence
VKKANVDPTV GAKFIQVSKL VKRFKPVTVN GVATKSILEQ VKQKEQNEPD YFKSQYKNSE 
RLSYLQKYLL EFNQVQPQAS LYVSFVLRPS DPEFPFDMEK LKLNMTVPPT FPVDRAARPS
IVVLNEEIPR GFAANIEIGF RRIADLARST LKDEEIELVS GSGLLSMVLT LDKYLEVFLK
QEKRETIKFV KTLKKPVEQI KPASPKPEQI GDIKIEQQPE YNNILKEVIE RRNQILEEMT
SKIGEKNRSK QETLIKVNIP IVKGSNFSKI PAYWIKNNFV EVMLSVPIDY PGSPVLFTIA
NNFSTNLIVK YGKDVEEQIN LVKLTREYRQ VEKDFGKNTK RFEFGDSSLI QKLNWLTNNL
GTFCLEPEQF QTWNDNVDKL QKQIV