Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_64253 |
Symbol | |
ID | 4841031 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009048 |
Strand | + |
Start bp | 32653 |
End bp | 33825 |
Gene Length | 1173 bp |
Protein Length | 385 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640392346 |
Product | predicted protein |
Protein accession | XP_001386407 |
Protein GI | 150866722 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTTAAGAAAG CAAATGTGGA TCCAACTGTA GGAGCAAAGT TCATCCAGGT ATCAAAATTG GTGAAACGGT TCAAACCTGT GACAGTAAAC GGTGTAGCTA CCAAGTCTAT TTTGGAGCAG GTCAAGCAAA AAGAACAGAA TGAACCGGAC TATTTCAAAT CACAATACAA GAACAGTGAA AGGCTATCGT ATCTCCAAAA GTACTTGCTA GAGTTCAATC AAGTTCAACC CCAGGCGCTG TTATACGTCT CTTTTGTATT GAGACCTTCC GATCCAGAAT TTCCTTTTGA CATGGAAAAG TTGAAGTTGA ACATGACTGT ACCACCAACT TTCCCTGTTG ATAGGGCAGC CCGGCCTAGC ATAGTTGTTT TGAACGAAGA GATTCCCCGA GGTTTTGCTG CCAATATCGA GATCGGGTTT AGAAGAATAG CGGATTTAGC CAGAAGTACT TTGAAGGACG AAGAAATTGA ACTTGTACTG GGCTCCGGTT TACTTTCTAT GGTTCTAACC TTGGACAAGT ACCTTGAGGT ATTCTTGAAA CAGGAAAAGC GAGAAACAAT TAAATTTGTC AAGACCTTGA AGAAACCTGT CGAGCAGATA AAGCCTGCAA GTCCAAAGCC CGAGCAAATT GGTGATATCA AGATTGAACA ACAACCGGAG TACAACAATA TATTGAAAGA AGTGATTGAA AGAAGAAATC AAATTTTAGA GGAAATGACC AGCAAAATAG GGGAAAAGAA TGTCAGAGTT TTCAAGAGAT CGAAGCAGGA GACACTCATA AAGGTCAATA TTCCAATAGT CAAAGGATCT AATTTCTCAA AGATCCCAGC TTATTGGATT AAGAATAACT TTGTCGAAGT GATGCTATCG GTTCCTATTG ATTATCCTGG ACTGCCAGTT TTGTTTACAA TCGCAAATAA TTTCAGCACC AATTTGATTG TTAAGTATGG TAAAGATGTC GAAGAACAAA TCAACTTGGT CAAGCTCACA AGAGAATATA GACAAGTAGA AAAGGATTTC GGAAAGAACA CCAAGAGATT CGAATTCGGA GATTCCAGCC TTATTCAAAA GTTGAATTGG CTCACGAATA ATCTCGGCAC TTTCTGTCTT GAACCTGAGC AATTCCAGAC TTGGAACGAC AATGTGGACA AGTTGCAGAA ACAAATTGTT TGA
|
Protein sequence | VKKANVDPTV GAKFIQVSKL VKRFKPVTVN GVATKSILEQ VKQKEQNEPD YFKSQYKNSE RLSYLQKYLL EFNQVQPQAS LYVSFVLRPS DPEFPFDMEK LKLNMTVPPT FPVDRAARPS IVVLNEEIPR GFAANIEIGF RRIADLARST LKDEEIELVS GSGLLSMVLT LDKYLEVFLK QEKRETIKFV KTLKKPVEQI KPASPKPEQI GDIKIEQQPE YNNILKEVIE RRNQILEEMT SKIGEKNRSK QETLIKVNIP IVKGSNFSKI PAYWIKNNFV EVMLSVPIDY PGSPVLFTIA NNFSTNLIVK YGKDVEEQIN LVKLTREYRQ VEKDFGKNTK RFEFGDSSLI QKLNWLTNNL GTFCLEPEQF QTWNDNVDKL QKQIV
|
| |