Gene PICST_63918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_63918 
Symbol 
ID4841044 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp132167 
End bp133336 
Gene Length1170 bp 
Protein Length378 aa 
Translation table12 
GC content45% 
IMG OID640392359 
Productpredicted protein 
Protein accessionXP_001386423 
Protein GI150866735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GAAGGTTATG GTAGACAGGA ATCGGGTAGA CAGGAGTCAG GTAGGCAAGA ATCGAACTAC 
GGCAGACAAG AATCTGGCTA TGGTAGAGAA GAGTCTGGAA GGCAACAAGT TTATGATAGA
CAAGAGTCTA GACAAGATTC TCAAGGCTAC CAAAGACCTC AAGGTTACCC TCAAGAAGCA
AGCTCTGGTG GTCGAGGTGA ATATTCCCGC CCTCCTGGAA AGCCTCAATC GTTTGGAGTT
GATGGTTATG AATACCAATA TTCCAACTGT AATGGATCTA AGAAGGCTCT TTTAATTGGG
ATCAACTATA CTGGTACTGC GAATCAGCTC AATGGTTGTG TCAACGATTG CAACAATGTG
CAAGAGTTTC TTTTGCAGAA TGGATTCTCA AAAGACAACA TTGTACTTCT CAATGACCAG
CAAACCAACA AGAGGTCTAT TCCTACAAGA GACAATATCT TGGATGGGGT GAAGTGGTTG
GTCAAAGATG CTCGTGCCAA TGACTCTCTT TTCTTCCACT ATAGTGGCCA TGGAGGTCAG
ACCCCAGATA AGACAGGTGA CGAAGCAGAC GGTAATGATG AAGTAATCTA TCCTTTGGAT
TTCGAAACTG CTGGGTTCAT TGATGACGAC ACTTTACATG AAATTATGGT GAATCCTTTG
CCCAAAGGTA CAAGACTTAC GGCCCTTTTC GACTCTTGTC ACTCTGGATC TGTCTTGGAT
TTACCTTACA CGTACTCTAC CAAGGGTGTT ATCAAGGAGC CCAATTTACT TGAAGAAGCT
GGTTCTGGCT TGTTGGACAC CTTCAAGGCA TACAGTCAAG GAAACCAGAA GGCTGTGGTT
CAGGGTATCA TGGGAGTGGC CAAGTCGTTC ATGAATAAGG AGAGAGCTGA AAAGGCCAAC
GAAGTCACCA AACAGACCAA GACTTCCCCA GCCGATGTTA TTACCTTGAG TGGGTGCAAA
GATGACCAAA CCAGTGCTGA TGCTAAGGAA AACGGACAAG CCACTGGAGC TATGAGCTAC
TCGTTCTTGA AGGTGATGAG AGAGAATCCT AAACAGTCAT ATCTCAGTTT GTTGAATGGA
ACGAGAGACA TCTTGGCCCT GAAGTATAGT CAAAAACCAC AGCTCTCGTC TTCACATCCT
ATCGATACCA ACTTGCAGTT TATCTTCTAG
 
Protein sequence
EGYGRQESGR QESGRQESNY GRQESGYGRE ESGRQQVYDR QESRQDSQGY QRPQGEYSRP 
PGKPQSFGVD GYEYQYSNCN GSKKALLIGI NYTGTANQLN GCVNDCNNVQ EFLLQNGFSK
DNIVLLNDQQ TNKRSIPTRD NILDGVKWLV KDARANDSLF FHYSGHGGQT PDKTGDEADG
NDEVIYPLDF ETAGFIDDDT LHEIMVNPLP KGTRLTALFD SCHSGSVLDL PYTYSTKGVI
KEPNLLEEAG SGLLDTFKAY SQGNQKAVVQ GIMGVAKSFM NKERAEKANE VTKQTKTSPA
DVITLSGCKD DQTSADAKEN GQATGAMSYS FLKVMRENPK QSYLSLLNGT RDILASKYSQ
KPQLSSSHPI DTNLQFIF