Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_63104 |
Symbol | |
ID | 4840719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | - |
Start bp | 652757 |
End bp | 655435 |
Gene Length | 2679 bp |
Protein Length | 892 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640392034 |
Product | conserved hypothetical protein |
Protein accession | XP_001386318 |
Protein GI | 150866651 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.167856 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTTG CTTCCTTGTG GACAATTGCG CTTGCACTCG TGACAGTTTC GGCGGTATTG CTTGAAGATG CGTTTTCAAA GGAAGCTATC CAGCACATCT ACGGCACATT GAAGCTGTAT TCAGTGATAA AAGCCAACAA AGCCATTGGT TTCAACGATC GGAGCCAATT CATTTCCATA CAGTTGGATA ATCCCAACTA CCTTGAATGG TCTGTGGAAT TGAGCTCTTT TCCGGCTTTG AATGATTTCC ATTTGGCACA GAACCACAAT TTGGCATATC TTTCCAGTAG TGAACAGGCC AGCTTGTATC TCTTTGAAAC GGCAAGCGGT GTCTATGTAC GTGAGATTAA GTTGGTATCT CCTCCCGTTA AAGTGGTAGA CTTCTTGAAC AGAGGCTTGT TAGTTTTGAC ATCTAATGGT GTATTACAAT ATGTCAAACA TGAATCTGGT GAAGTCAAGA CAGTATACGA TTTCGATCAA CCCACCACTA TTCTCTTTGA TCTGAGAGAC GGTTTTGGAA GCGTTATTGC AGGAAAACTT CTATTGAAGA TCAATGCCTT AGCTGAAGTT GTTTCTGTTT CAGAAAGCTT GCCAATCATA AATGCCAAAT TATTTAAGGA TGGCGTAGTA GTCACAGGAA ATGATGCCGT GTACAAATTC GATGAGAATG GTACCGATGT TGTAGAAATT ACAACAGGCA AAGTCTTAAA TCTTGACATC ATCAACAATA ACTATTTGTA CACATTCACA AACGATTCAG TCATTTTATA TTCCATCAGT GCGAAGAACA ATCTAGAAGT TTCTGAGACT TTGACCACTT CTCTGGAAAT AGTAAACGTT TCATACGAGA ATTTTGGTCT CAATGACTTC ATAATTGTGA CTACTAAAAA CGGTCGCAAA TCCGTTTACG ACTTAACTGA CTTTTTGGTT CTTGACGAAC CCTCTAGCAT TAAAATTGTC GATACAAAAG TCGAGCAATT GTACACTGAT GACTTTATCA CTGTGTTCAA TGGTAACTAC CAGTTGGTTT CCATAGGTCC AGATGTCAAC GGGAAGATTT TTGACTTGAG CAACGGCCAT TTGGTTAAAA ATGTGGTTTC TGTGAACCAA TTCGTATCTG TCAATAGTAA GTACTTGATT ATCGACAAGC CCGAGTCACA ACAGACACTC AATGAGTTCC ACCATCTTCT TGAAGATGCT AACACTGGCT TCATTGTTAC CAATTGGCTA CTCAGAGTCA AGAGACACTT GAGTGAATTG GGCAAGTATG TAGTTTCATT TTTCGCAAAG GTTGAAGATA CAGAAACTAT TAATGCTGTC GAGGGAGACG AATTCGGTTT TGGAAAATTG ATTATCTTCT TTGAAGATTC TGCAAAGGCT ATCATAGCTC TAAATTCAGT TGATGGAACT TTGGTATGGA AGAGCACGGC AGTTTTTGAT GGATCATTTG TTGAACTCAT TACCTATCAA GACAATCTTG TAGCATTGTT TTCTCTGGGA TTGTACTTCA TCAATAGTCG AGATGGTTCT GTATTGTCTT TTGAACAGCT CGGCGAAGAG TATTCTGGAT TATTCAAATC TTCGTCTAAT GAAGAAGACT CTTCCAAGAT TATCTTGAAG AAGGAAAACC AATTCAGTAT CTTCAATGGT ACTGATGAAA ACGATTTGTT CTTTGTTGAT AACGATGATA CCACAGTTTC TGGGTTCAAG ATTTCTGCAG GAGACTCCAG TTCCTTTGGT ACCTGGAAGT TTTCCAAATC AAACGAAAAG ATTATATCGC TTGCTTCGAA ACCATTCTCG ACCACTACCT CTTCCTTGGG TATCTCATTG GCCAATAAAG ATGTGTTGTA CAAATACTTG AATCCCAACG TTATCTCTGT TTTGACAAAA GATAATGAAA ATGAACAATT GAAGTTCTAC TTGTTGGACG CTGTTACCGG CAATTTGTTG CATTCGTTTG AACACAAGAG AGAAGAGGTT GTGGATTTCA GTTCCATCAA TTTAATTATG GATGACAACT GGATTATCTA CTCTTATTTT GTCATTGCAC CATCATTAGA GCAAAGATTC AATGTTATCG ACTTATTTGA CACAGAGAAA AGCTTGAAGA AAGATAATGC CAACTCTGTA TCTGAATTTA GTCACAATTC TACTATTGAC AGCTATTCTA TCAAGTCCTT CATATTCCCG GAAAGAATAT ACGGCATGTC ATCTACTCAA TCTCTATACG GAATCACTTT GAAATCGATT ATAGTAGCAA CAGAAAATGG TGCTTTGATT GAGATTCCAA AACATCTACT CAATAGTAGA AGAATTGACG ACAGAGAATT GACACAGGCT GACTTCCAAA GTGACTTCAA AATGATTCCT TATGAACCAG TTATTGCTAG AAATGCGTTC CAGATTCTCA ATCACAAACA CCAATTGAAA GTGACCAAAG ATGGCAACAT TTTGACTAGA CCTACACATT TCGAATCTAC TTCGGTGGTC TGTTATTATA ATGATTTCAA TCAATTCTGT ACAACCGTTC AACCATCTTC TTCTTTTGAT TTGTTGAGCA GAGGTTTCGA CAGCGTGAAA TTGTTGATAA CAATTGCCAT CTTGTTTGCC GTATATCTCG GCTCGAAGCC GTTTGTTTAC AACAAAAAAT TAAATGCTCA ATGGATTGAC CGTGCATAA
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Protein sequence | MRFASLWTIA LALVTVSAVL LEDAFSKEAI QHIYGTLKSY SVIKANKAIG FNDRSQFISI QLDNPNYLEW SVELSSFPAL NDFHLAQNHN LAYLSSSEQA SLYLFETASG VYVREIKLVS PPVKVVDFLN RGLLVLTSNG VLQYVKHESG EVKTVYDFDQ PTTILFDSRD GFGSVIAGKL LLKINALAEV VSVSESLPII NAKLFKDGVV VTGNDAVYKF DENGTDVVEI TTGKVLNLDI INNNYLYTFT NDSVILYSIS AKNNLEVSET LTTSSEIVNV SYENFGLNDF IIVTTKNGRK SVYDLTDFLV LDEPSSIKIV DTKVEQLYTD DFITVFNGNY QLVSIGPDVN GKIFDLSNGH LVKNVVSVNQ FVSVNSKYLI IDKPESQQTL NEFHHLLEDA NTGFIVTNWL LRVKRHLSEL GKYVVSFFAK VEDTETINAV EGDEFGFGKL IIFFEDSAKA IIALNSVDGT LVWKSTAVFD GSFVELITYQ DNLVALFSSG LYFINSRDGS VLSFEQLGEE YSGLFKSSSN EEDSSKIILK KENQFSIFNG TDENDLFFVD NDDTTVSGFK ISAGDSSSFG TWKFSKSNEK IISLASKPFS TTTSSLGISL ANKDVLYKYL NPNVISVLTK DNENEQLKFY LLDAVTGNLL HSFEHKREEV VDFSSINLIM DDNWIIYSYF VIAPSLEQRF NVIDLFDTEK SLKKDNANSV SEFSHNSTID SYSIKSFIFP ERIYGMSSTQ SLYGITLKSI IVATENGALI EIPKHLLNSR RIDDRELTQA DFQSDFKMIP YEPVIARNAF QILNHKHQLK VTKDGNILTR PTHFESTSVV CYYNDFNQFC TTVQPSSSFD LLSRGFDSVK LLITIAILFA VYLGSKPFVY NKKLNAQWID RA
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