Gene PICST_63104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_63104 
Symbol 
ID4840719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009047 
Strand
Start bp652757 
End bp655435 
Gene Length2679 bp 
Protein Length892 aa 
Translation table12 
GC content38% 
IMG OID640392034 
Productconserved hypothetical protein 
Protein accessionXP_001386318 
Protein GI150866651 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.167856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTG CTTCCTTGTG GACAATTGCG CTTGCACTCG TGACAGTTTC GGCGGTATTG 
CTTGAAGATG CGTTTTCAAA GGAAGCTATC CAGCACATCT ACGGCACATT GAAGCTGTAT
TCAGTGATAA AAGCCAACAA AGCCATTGGT TTCAACGATC GGAGCCAATT CATTTCCATA
CAGTTGGATA ATCCCAACTA CCTTGAATGG TCTGTGGAAT TGAGCTCTTT TCCGGCTTTG
AATGATTTCC ATTTGGCACA GAACCACAAT TTGGCATATC TTTCCAGTAG TGAACAGGCC
AGCTTGTATC TCTTTGAAAC GGCAAGCGGT GTCTATGTAC GTGAGATTAA GTTGGTATCT
CCTCCCGTTA AAGTGGTAGA CTTCTTGAAC AGAGGCTTGT TAGTTTTGAC ATCTAATGGT
GTATTACAAT ATGTCAAACA TGAATCTGGT GAAGTCAAGA CAGTATACGA TTTCGATCAA
CCCACCACTA TTCTCTTTGA TCTGAGAGAC GGTTTTGGAA GCGTTATTGC AGGAAAACTT
CTATTGAAGA TCAATGCCTT AGCTGAAGTT GTTTCTGTTT CAGAAAGCTT GCCAATCATA
AATGCCAAAT TATTTAAGGA TGGCGTAGTA GTCACAGGAA ATGATGCCGT GTACAAATTC
GATGAGAATG GTACCGATGT TGTAGAAATT ACAACAGGCA AAGTCTTAAA TCTTGACATC
ATCAACAATA ACTATTTGTA CACATTCACA AACGATTCAG TCATTTTATA TTCCATCAGT
GCGAAGAACA ATCTAGAAGT TTCTGAGACT TTGACCACTT CTCTGGAAAT AGTAAACGTT
TCATACGAGA ATTTTGGTCT CAATGACTTC ATAATTGTGA CTACTAAAAA CGGTCGCAAA
TCCGTTTACG ACTTAACTGA CTTTTTGGTT CTTGACGAAC CCTCTAGCAT TAAAATTGTC
GATACAAAAG TCGAGCAATT GTACACTGAT GACTTTATCA CTGTGTTCAA TGGTAACTAC
CAGTTGGTTT CCATAGGTCC AGATGTCAAC GGGAAGATTT TTGACTTGAG CAACGGCCAT
TTGGTTAAAA ATGTGGTTTC TGTGAACCAA TTCGTATCTG TCAATAGTAA GTACTTGATT
ATCGACAAGC CCGAGTCACA ACAGACACTC AATGAGTTCC ACCATCTTCT TGAAGATGCT
AACACTGGCT TCATTGTTAC CAATTGGCTA CTCAGAGTCA AGAGACACTT GAGTGAATTG
GGCAAGTATG TAGTTTCATT TTTCGCAAAG GTTGAAGATA CAGAAACTAT TAATGCTGTC
GAGGGAGACG AATTCGGTTT TGGAAAATTG ATTATCTTCT TTGAAGATTC TGCAAAGGCT
ATCATAGCTC TAAATTCAGT TGATGGAACT TTGGTATGGA AGAGCACGGC AGTTTTTGAT
GGATCATTTG TTGAACTCAT TACCTATCAA GACAATCTTG TAGCATTGTT TTCTCTGGGA
TTGTACTTCA TCAATAGTCG AGATGGTTCT GTATTGTCTT TTGAACAGCT CGGCGAAGAG
TATTCTGGAT TATTCAAATC TTCGTCTAAT GAAGAAGACT CTTCCAAGAT TATCTTGAAG
AAGGAAAACC AATTCAGTAT CTTCAATGGT ACTGATGAAA ACGATTTGTT CTTTGTTGAT
AACGATGATA CCACAGTTTC TGGGTTCAAG ATTTCTGCAG GAGACTCCAG TTCCTTTGGT
ACCTGGAAGT TTTCCAAATC AAACGAAAAG ATTATATCGC TTGCTTCGAA ACCATTCTCG
ACCACTACCT CTTCCTTGGG TATCTCATTG GCCAATAAAG ATGTGTTGTA CAAATACTTG
AATCCCAACG TTATCTCTGT TTTGACAAAA GATAATGAAA ATGAACAATT GAAGTTCTAC
TTGTTGGACG CTGTTACCGG CAATTTGTTG CATTCGTTTG AACACAAGAG AGAAGAGGTT
GTGGATTTCA GTTCCATCAA TTTAATTATG GATGACAACT GGATTATCTA CTCTTATTTT
GTCATTGCAC CATCATTAGA GCAAAGATTC AATGTTATCG ACTTATTTGA CACAGAGAAA
AGCTTGAAGA AAGATAATGC CAACTCTGTA TCTGAATTTA GTCACAATTC TACTATTGAC
AGCTATTCTA TCAAGTCCTT CATATTCCCG GAAAGAATAT ACGGCATGTC ATCTACTCAA
TCTCTATACG GAATCACTTT GAAATCGATT ATAGTAGCAA CAGAAAATGG TGCTTTGATT
GAGATTCCAA AACATCTACT CAATAGTAGA AGAATTGACG ACAGAGAATT GACACAGGCT
GACTTCCAAA GTGACTTCAA AATGATTCCT TATGAACCAG TTATTGCTAG AAATGCGTTC
CAGATTCTCA ATCACAAACA CCAATTGAAA GTGACCAAAG ATGGCAACAT TTTGACTAGA
CCTACACATT TCGAATCTAC TTCGGTGGTC TGTTATTATA ATGATTTCAA TCAATTCTGT
ACAACCGTTC AACCATCTTC TTCTTTTGAT TTGTTGAGCA GAGGTTTCGA CAGCGTGAAA
TTGTTGATAA CAATTGCCAT CTTGTTTGCC GTATATCTCG GCTCGAAGCC GTTTGTTTAC
AACAAAAAAT TAAATGCTCA ATGGATTGAC CGTGCATAA
 
Protein sequence
MRFASLWTIA LALVTVSAVL LEDAFSKEAI QHIYGTLKSY SVIKANKAIG FNDRSQFISI 
QLDNPNYLEW SVELSSFPAL NDFHLAQNHN LAYLSSSEQA SLYLFETASG VYVREIKLVS
PPVKVVDFLN RGLLVLTSNG VLQYVKHESG EVKTVYDFDQ PTTILFDSRD GFGSVIAGKL
LLKINALAEV VSVSESLPII NAKLFKDGVV VTGNDAVYKF DENGTDVVEI TTGKVLNLDI
INNNYLYTFT NDSVILYSIS AKNNLEVSET LTTSSEIVNV SYENFGLNDF IIVTTKNGRK
SVYDLTDFLV LDEPSSIKIV DTKVEQLYTD DFITVFNGNY QLVSIGPDVN GKIFDLSNGH
LVKNVVSVNQ FVSVNSKYLI IDKPESQQTL NEFHHLLEDA NTGFIVTNWL LRVKRHLSEL
GKYVVSFFAK VEDTETINAV EGDEFGFGKL IIFFEDSAKA IIALNSVDGT LVWKSTAVFD
GSFVELITYQ DNLVALFSSG LYFINSRDGS VLSFEQLGEE YSGLFKSSSN EEDSSKIILK
KENQFSIFNG TDENDLFFVD NDDTTVSGFK ISAGDSSSFG TWKFSKSNEK IISLASKPFS
TTTSSLGISL ANKDVLYKYL NPNVISVLTK DNENEQLKFY LLDAVTGNLL HSFEHKREEV
VDFSSINLIM DDNWIIYSYF VIAPSLEQRF NVIDLFDTEK SLKKDNANSV SEFSHNSTID
SYSIKSFIFP ERIYGMSSTQ SLYGITLKSI IVATENGALI EIPKHLLNSR RIDDRELTQA
DFQSDFKMIP YEPVIARNAF QILNHKHQLK VTKDGNILTR PTHFESTSVV CYYNDFNQFC
TTVQPSSSFD LLSRGFDSVK LLITIAILFA VYLGSKPFVY NKKLNAQWID RA