| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_63037 |
|---|
| Symbol | |
|---|
| ID | 4840425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009047 |
|---|
| Strand | - |
|---|
| Start bp | 139965 |
|---|
| End bp | 141674 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640391740 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001386241 |
|---|
| Protein GI | 150866591 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.944727 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACCGTA GACCAAAGAT AGCATCCAAA TCTCCGTTTA AACACCCATG GTGGGCAGCC
TACACAGGAG TAGGTCCAAC CATAAAATGC AAAGACGAAT GGTTGATTAT TGAGATTTCC
AACAGTATCC GTCAAAAGCC CAACTGGAAA GCAAAGTACA AAGATCCTAC GATCTCGGCC
AAATGGAAAC AGGAGGTTAA GGACTTCTAC AACGACAGGA CTAAACTCAT TGATGAAGTA
ATTGACTACG TTTTTCTCGA ATTGGAATGG TATGAGAAGA CTGAACACGA CTTCCCTGGA
TTTAAAGGCA AGGAATATTC CATTGGATGT GATGATAAGA TTGTCTTTGC TGATAAAGCC
ATTGATCCTC AACTCGCGGC CACCTTCAAG AGAGACATCG ATAAATTAGC AGAATCCTTT
GGTGGCGATT TGGACTACCA TCCAAAAACA GATAACAAGG TCATTGACTT AGTCCATCCT
TCTTTGTTTC CGTTACAATA CGGCATTACT CCAATTTATT CTTCCAACAA GAACCAGGTC
GAAGTGGTAG AGTACGAGGA GAAAATTGAA TTTTTCAAAA ATGCAGTCAT GCCCTTTGGC
ATTTCGAAGA ATTTCCAATG GCTTCCTGCT CTATTATCAT TCAACAAAGC ACTGAGCAGC
TTTGAGTTTA TTTCCTACAT CAACAATTTG CACCCAGCAA AACATGCCAA GTTATACTCC
TCAATCCAAG CAATTTTCAA CTCTGTTTTG CCTGGCTTGA ACTATATCTT ATCTAAGGCT
GTTTCCAAGG AATACATTAG AATTGAAATT CCTAAATACA ACGATGCATA CCTGGATGAG
TATAAGCAAA AACTTGAGGA TATTTGGAAT GGAGAAGATG CGGTTGCGGA TGAGATCTGG
GACGAGCTTC AAGATAATAG AGTCAACTAT TTGAAGACTT TCACTCCCAT TTACGATCAG
GGCCCTATTA TCGACAAAGA AATCGATGTT GTTAGGGACT TCCAGAAATT GAAGGTCATT
GTCAAGTTGG CGAACATTGA ATTGACTCCA GAGAGGCCCA CCTACGAAGG GGGAGCATGG
CATGTGGAAG GAACAATCAA CGAAGACATT GTTGCTACCG TTTTGTACTA CTATGATTCA
GAAAACATCA CGGAATCTAA GTTGAAGTTT AGAACTGGAT TTGAAGATCC AGAATACGAG
CAAAACGATG ACGACTACGG AAGAGAGATC TTTGGTGTCA ATGACGAAGA TTTAATGGTA
AAAGAGCTTG GACATGTTAT TTCTCGAGAA GACAGAGTTG TAATTTTCCC CAATATATTC
CAACACCAAG TTGATACCTT CGAATTGGCC GACAAGTCCA AGAAGGGTCA CCGTAAGATC
CTTTGTTTTT TCATCGTTGA TCCGTACAAT GATTTGGTGG TTACTACTGA TCAAGTTCCT
CCCCAACAGA AGGAATGGTG GGACGATTTG GGGCTTTTCA AAGAACATGA TGAAGATGCC
AAAGCTGGAC CTCTCAATTC CACACTAATT TCTGATAATA TCATGAAACA AATCTTGGAT
TTGAAGAAAG GAAATATCTG GCCCATAGAT TTGACTAGTG CAAAGAAAGT AAGAGAAGCA
CTCATGGATG AAAGAACAGC AGCTGACAAC GATCCTCAAG TTAGTGACTT GGGAGCATTC
AAGAGACAGT TTTCACTCTG CGAGCATTGA
|
|---|
| Protein sequence | MYRRPKIASK SPFKHPWWAA YTGVGPTIKC KDEWLIIEIS NSIRQKPNWK AKYKDPTISA
KWKQEVKDFY NDRTKLIDEV IDYVFLELEW YEKTEHDFPG FKGKEYSIGC DDKIVFADKA
IDPQLAATFK RDIDKLAESF GGDLDYHPKT DNKVIDLVHP SLFPLQYGIT PIYSSNKNQV
EVVEYEEKIE FFKNAVMPFG ISKNFQWLPA LLSFNKASSS FEFISYINNL HPAKHAKLYS
SIQAIFNSVL PGLNYILSKA VSKEYIRIEI PKYNDAYSDE YKQKLEDIWN GEDAVADEIW
DELQDNRVNY LKTFTPIYDQ GPIIDKEIDV VRDFQKLKVI VKLANIELTP ERPTYEGGAW
HVEGTINEDI VATVLYYYDS ENITESKLKF RTGFEDPEYE QNDDDYGREI FGVNDEDLMV
KELGHVISRE DRVVIFPNIF QHQVDTFELA DKSKKGHRKI LCFFIVDPYN DLVVTTDQVP
PQQKEWWDDL GLFKEHDEDA KAGPLNSTLI SDNIMKQILD LKKGNIWPID LTSAKKVREA
LMDERTAADN DPQVSDLGAF KRQFSLCEH
|
|---|
| |