| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_62666 |
|---|
| Symbol | AGL1 |
|---|
| ID | 4839770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | + |
|---|
| Start bp | 37412 |
|---|
| End bp | 39130 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640391085 |
|---|
| Product | alpha-glucosidase maltase |
|---|
| Protein accession | XP_001385341 |
|---|
| Protein GI | 126137636 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.97685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.170022 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATTA CTCGCAACTG GTGGAAAACC TCCACCGTTT ATCAGATTTG GCCAGCTTCT
TATAAGGACT CTAATGGTGA TGGAATTGGT GATATTAAAG GTATTATCTC AACTTTGGAC
TATCTCAGAG ACTTGGGGGT TGATGTTATT TGGTGTAGTC CGATGTACGA CTCACCACAG
GATGACATGG GTTACGACGT TAGAGACTAT GAAAAGGTAT ATCCAAAATA TGGTACAAAC
GACGATATGC AGTTACTTAT TGACGAGTGT CACAGTCGTG GTATGAAATT GATTTTGGAC
TTGGTTATTA ACCACACTTC AAGTGAGCAC GTATGGTTCA AGGAATCGAG ATCCTCCAAG
ACAAATCCAA AAAGAGATTG GTATATTTGG AAACCACCCA AATACGATGA AGAAGGCAAC
AGACGCCCAC CCAACAATTG GGCATCTTAC TTCTCTGGTT CTGCTTGGGA GTACGATGAG
CGCACAGATG AGTACTACTT GAGACTTTTT GCCAGTTCCC AGCCAGACCT AAATTGGGAA
AATGAAGAGA CCAGAAATGC CATCTACGAA TCTGCAGTGA AGTTTTGGTT GGACAAAGGC
GTAGATGGGT TCAGAATCGA CACTGCTGGT TTATACTCTA AGGTTCAAAC TTTTCCAGAT
ACTCCGATCA TCTTTCCAGA GGAAGAATTT CAATCGAGTA AGTTGTACAG TCAGAATGGT
CCCCGTATTC ATGAGTTTCA CAAGGAAATG TACTCAAAGG TCACAAGTAA ATATGATGCA
ATGACAGTTG GCGAAGTTGG TCATTGTTCT CGCGAAGACG CCTTGAAGTA CGTAAGTGCT
AAAGAGCATG AAATGAACAT GATGTTTCTT TTCAATAAAG TGTGGGTCGG ATGTGACAGA
AACGATCGTT GGAAATTTGA TGGTTGGAAA TTGACCGATT TTAAGAAGGC CGTTGAAATA
GATTGTGATT TCATTGCTGG GACAGATGCT TGGTCAACCG TTTTCATTGA AAATCATGAC
CTTCCCAGAT GTGTTACTAG ATTTGGAGAC AAAAAACATC GTTCCCAAGC TGCTAAGTTA
CTCTCAATTT TAGGTACTAC ATTGACTGGT ACACTCTTTA TCTATCAGGG CCAAGAAATT
GCCATGGAAA ACTTGCCAAG AGATTGGTCA ATTGATGAAT ATAAAGACAT CAATACAATC
AACAGATACA AGGAGTTCAA GGATAAATAT GGAAATGATC CTGATTTCAA GGAAAAAGAG
GAAAAGTTGA TGGATATAAT TAATCTATTG GCTAGAGATA ATAGCAGATC CCCAGTTCAA
TGGGATGCAT CTCCAAACGC TGGATTTACC ACAGGAATTC CATGGACAAG AGTCAATGAG
AACTATACCA CAATCAACGT TGAAAGTCAA ATTAGAGATC CAAATTCTGT TTTAAACTTC
TACAAGAAGT CTATTCAAAT TAGAAAAAGT TATCAAGACT TGCTCATTTT TGGAGATATG
AAGATCTTAG ATTATGAAAA TCAAAAGACC TTTACCTACC TAAAGTTGAA CGAGAATGCT
TTATCGCCAA AAGCTTATAT TGTCTTGAAT TTCTCCAATG AAGAAGTCAA CTTTGAAAAG
TTGATTAATG GTGATTTTGA ACTAGTTCTC AGTAATGTAG ATGTTATCAA TGAACAGAAA
TTGTCTCCAT TTGAAGCACG TCTTTACATT GTTGATTAA
|
|---|
| Protein sequence | MTITRNWWKT STVYQIWPAS YKDSNGDGIG DIKGIISTLD YLRDLGVDVI WCSPMYDSPQ
DDMGYDVRDY EKVYPKYGTN DDMQLLIDEC HSRGMKLILD LVINHTSSEH VWFKESRSSK
TNPKRDWYIW KPPKYDEEGN RRPPNNWASY FSGSAWEYDE RTDEYYLRLF ASSQPDLNWE
NEETRNAIYE SAVKFWLDKG VDGFRIDTAG LYSKVQTFPD TPIIFPEEEF QSSKLYSQNG
PRIHEFHKEM YSKVTSKYDA MTVGEVGHCS REDALKYVSA KEHEMNMMFL FNKVWVGCDR
NDRWKFDGWK LTDFKKAVEI DCDFIAGTDA WSTVFIENHD LPRCVTRFGD KKHRSQAAKL
LSILGTTLTG TLFIYQGQEI AMENLPRDWS IDEYKDINTI NRYKEFKDKY GNDPDFKEKE
EKLMDIINLL ARDNSRSPVQ WDASPNAGFT TGIPWTRVNE NYTTINVESQ IRDPNSVLNF
YKKSIQIRKS YQDLLIFGDM KILDYENQKT FTYLKLNENA LSPKAYIVLN FSNEEVNFEK
LINGDFELVL SNVDVINEQK LSPFEARLYI VD
|
|---|
| |