Gene PICST_62621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_62621 
Symbol 
ID4840173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1066540 
End bp1067469 
Gene Length930 bp 
Protein Length310 aa 
Translation table12 
GC content45% 
IMG OID640391488 
Productpredicted protein 
Protein accessionXP_001385560 
Protein GI150866083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.15027 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.247728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTCGCTGTTA TCGATAGATA CACTGTCTTG TTGAAGGATG GTGAGACAAC TGCTACCATT 
TATCCCATCC ATACGACAAA TGAACTTCCA CCAGGATTGC TTGCGTTTTT ATGTGACGAG
TTCAATATGG AAATTGAAAG AGGTGAGACT TCCAGCTTTT TTGATACTCT TCATATTGAG
CAGTTCCAAA ATTATTGGTT TGGAGCTTTC GCTGCCGTAA TGGTGTTAGG AGATTCTCCG
GCTCTAGAGG GTTCTAGACA ATGGGAAAAG GAGTGTTTGG GTACCTTTTT CATCAAGCCC
AACTATCCAG GCCGGTGTTC ACACATTTGC ACGGGAAACT TCTTGGTTAA TGCTGGGATT
CGTGGCAAAG GCATTGGTAG AACGCTCACA GACTGCTATT TGCAATGGGC ACCTAGACTC
GGATACACCT ATTCTATATT TAACTTAGTT TTTGAAACGA ATGTGGCAGC TCGTAGCATT
TGGGAGTCAC TTAATTTCAA GAGAATCGGC CGTGTCAAGC TGGCTGGTAT TCTTAAGGGT
CATGAACAGG CTGTGGATGC CATTATGTAT GGAAGAGAAT TGATCAACAC CTCGGATCCC
GCCGTTGGTG CTTATCGGTT TGACAAGATC AAGTTCTACT TGGAAACTGG CAGATATCCA
GCGATGGCTG ATCGTCAGGA GAAGTCTCGA TTACGTTCCT CGGCTTCCCA TTATCGATTG
GAGAATGGAA AGTTGATGCT TAAGGGTCGA GAAGTTGTGA GTAATCCTGT AAGACAGTTA
CAGATCTGCA CCGAAGTCCA CTTGTCGAAC CACGGAGGCA TCAACAAGAC AACATCCATT
GTGACAGAGA AGTACCACTG GACAAGAATA AAAGACACTG TAGCCACTGC CATTAAGAAT
TGTGCCGAAT GCAGAGATCC TTCTCGCGAC
 
Protein sequence
VAVIDRYTVL LKDGETTATI YPIHTTNELP PGLLAFLCDE FNMEIERGET SSFFDTLHIE 
QFQNYWFGAF AAVMVLGDSP ALEGSRQWEK ECLGTFFIKP NYPGRCSHIC TGNFLVNAGI
RGKGIGRTLT DCYLQWAPRL GYTYSIFNLV FETNVAARSI WESLNFKRIG RVKSAGILKG
HEQAVDAIMY GRELINTSDP AVGAYRFDKI KFYLETGRYP AMADRQEKSR LRSSASHYRL
ENGKLMLKGR EVVSNPVRQL QICTEVHLSN HGGINKTTSI VTEKYHWTRI KDTVATAIKN
CAECRDPSRD