Gene PICST_61997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_61997 
Symbol 
ID4840362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp688524 
End bp689630 
Gene Length1107 bp 
Protein Length368 aa 
Translation table12 
GC content44% 
IMG OID640391677 
Productpredicted protein 
Protein accessionXP_001385484 
Protein GI150866020 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton 
COG ID[COG5019] Septin family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.132293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTGTG GTGAAAGCGG CTTGGGTAAG ACGACATTCA TCAACACGTT ATTCCAGTCG 
TCGTTGAAGT CGTATCAGAG TGCTTCGGAA AGACACAACA AGTTTACTCT GGCTCACCAG
AATGTAGACA TCGACATTGT GAGAGCCATT TTGGAGGAAA AGAACTTCAA GATCAGATTG
AACATTATCG ACACCCCCGG ATTCGGTAAC AATGTTAACA ACCACGATTC ATGGACGCCA
ATCATCGACT TCATTGACGA TCAGCACGAG TCGTATATGA AACAGGAACA ACAGCCTTCG
AGAAAAGACA AGAAGGACTT GAGAGTACAT GCCTGTCTCT ATTTCATAAG ACCCACTGGA
CACTCGTTGA AGCCTTTGGA CATTGAGATC ATGAAGCGTC TTTCCACCAG AGTTAACTTG
ATCCCGGTCA TTGCCAAATC AGACACCTTG TCCCCCTCGG AATTAGAAAC TTTCAAAACG
AGAATCAGAG ACGTAATTGA AGCACAAGAC ATTAACATTT ATACACCACC TTTGGAGTTG
GACGACCCTG CCAGTGCCGA ACACTCTAAG CAGTTGATCG AAGCTATGCC CTTCGCTGTT
ATTGGCTCTG AGGAAGAAGT GGAAGTCACT CCAGGTCAAT TTGTAAGAGG TAGAAAGTAT
CCATGGGGCT TGGTTGAAGT GGAAAATGAA CAGCATTGTG ACTTCAAGAA ATTGAGAAGC
TTGTTGTTAA GAACCAATAT GTTGGACTTG ATTTTGTCTA CCAACGAGTT CCACTTTGAG
ACGTTCAGAT CCATCAAGAT GGGTGGAACA GACGAAGATG GCGAGGACAA CGACAAGGAG
TTGACCAACG AGAATGGCGA GGTGATCAAG AAGCCTTCCA CCTCCAAGAA ACCAAGAAGA
TTACATAACC CCAAGTTCAA AGAGGAAGAA GATGCATTGA AAAAGTTCTT CACCGAACAA
GTCAAGGCAG AGGAACAGAG ATTCAGACAA TGGGAAACCA ACATTGTCAA CGAGAGAAAT
AGATTGAACC AGGACTTGGA AGAAATGCAG ACCAAGTTGA AGACGTTGGA GGACCAGGTC
AAGAAGTTGC AATTGGCCAA GCGTTAG
 
Protein sequence
MVCGESGLGK TTFINTLFQS SLKSYQSASE RHNKFTSAHQ NVDIDIVRAI LEEKNFKIRL 
NIIDTPGFGN NVNNHDSWTP IIDFIDDQHE SYMKQEQQPS RKDKKDLRVH ACLYFIRPTG
HSLKPLDIEI MKRLSTRVNL IPVIAKSDTL SPSELETFKT RIRDVIEAQD INIYTPPLEL
DDPASAEHSK QLIEAMPFAV IGSEEEVEVT PGQFVRGRKY PWGLVEVENE QHCDFKKLRS
LLLRTNMLDL ILSTNEFHFE TFRSIKMGGT DEDGEDNDKE LTNENGEVIK KPSTSKKPRR
LHNPKFKEEE DALKKFFTEQ VKAEEQRFRQ WETNIVNERN RLNQDLEEMQ TKLKTLEDQV
KKLQLAKR