Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_61741 |
Symbol | |
ID | 4840029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 651390 |
End bp | 652247 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640391344 |
Product | predicted protein |
Protein accession | XP_001385827 |
Protein GI | 150866281 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.116623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTGA TCCTCTTGGA CACAAATCCT TACTTGTACA AGTATTGGAG CGTCCACTAC AGCCAGCTTC TGTCTATTCT CAAAATATAT GGTCTTAGTC CCCTTAATGA CTTGAAACTA CATTTCAAAA ACTGCTCTAT AGAGTCGTTG GTGATATCTA AGCCTGAACA GAACTTGGGA AACAAGTCCA CAGCGATAGT GACTCCGACT AACTCGTTAT CGTACATGGG TGGCGGTTTC GATAAATATC TTCTACAGTC ATTATTGCTT CCTAGTACAA TCAGCTACAA GCAAATAGAG CCTCTAATAC AGCACTATAG TCTCAATAAG TTCAACGGTT ACCTTCCTGT GAACCTGACT AATATCATAG AACTTTTGAC AGTGTTTGGT GACGTCCATG ACTATGAACA GTCACATGCA TACAAGAACT GGAACATCAC CACGGTCATC CAGGTGCCTT CTATGATTGT TCCTGAAGCC GTAGGTTCTA AGACAAACAT TTTTGATAGC ATCTTCAATG TCATGCTAGC TACAGCTCAG CAGCCTATAG GTAATCTTAT AATCCCAGGA ATTGGAACAG GCTATGGACA GTTGGATCCT GAGGAAATCG CCAAAATAAT GATTTTTTCC ATAGTTCTCT TCAACTTGAA CTTGGGCACC GATCGGTTTT CTCATCTCAA GAAGTCGTGT TTGATTCTCT TTTTCTTCAA CAAGGACTAC CGTAAACTTT CAAACGAGTT GGACCTCTTC GAGCTTCATG AAAAGGTTAT TTCGGAGTAC GGAAAGACTC GTGTCACACA GTGTGGTGAT GAACTCATGG AATTTGAAGA GCTCTTCAAA TGTATTAGAT TGGAATAG
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Protein sequence | MNLILLDTNP YLYKYWSVHY SQLSSILKIY GLSPLNDLKL HFKNCSIESL VISKPEQNLG NKSTAIVTPT NSLSYMGGGF DKYLLQSLLL PSTISYKQIE PLIQHYSLNK FNGYLPVNST NIIELLTVFG DVHDYEQSHA YKNWNITTVI QVPSMIVPEA VGSKTNIFDS IFNVMLATAQ QPIGNLIIPG IGTGYGQLDP EEIAKIMIFS IVLFNLNLGT DRFSHLKKSC LILFFFNKDY RKLSNELDLF ELHEKVISEY GKTRVTQCGD ELMEFEELFK CIRLE
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