Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_60913 |
Symbol | |
ID | 4839550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1382905 |
End bp | 1384719 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640390865 |
Product | hypothetical conserved protein |
Protein accession | XP_001384952 |
Protein GI | 150865642 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.519825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00460496 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTACAC TCAACAAACT GGATAGATAC ATCTATAACC TAGAGCCCAG GACTTTAGAG TCATTGGAGT TGCTATACTT TGATTCAGCG ACTTCTGAAA TTTGCAAACC GGTCCACGAC GAAAACGAGA TCAGATCCTC GTTTAGAAGC CTCAGCATTT CATCTGAATC AACTACTTTC ATTCCAAAAC AGAACCAGGA CACTTCGTAC TACAAATCTG ATTTATACAG ATACAATTTG AAACGCTCGC TCAATAACCT CGAGCCTCTT TCCGAGGGCC AGTTCGAGGA GTTGTTGGAG AAGCAGTCGA TTGAGAGTTT ATCTGGCTCA GAGTCTGAAT CAGATGAAGG CGAAGCAAAT GAAGAGAGTA AAAAAGTAGA ATCGTTAATG AAGAACTTAA CTGTACAATC TCAGACCCAG TATCCGCAAG AAGAGGAACA AGAATCCACC GTGAGTTTCA TGAATACCAA GAATCCATAC ATATTGTTTG GGTCTTCATT ACTACCACAA GGGAAAGCCT TTGGAATCTA TAAGTCTCTC TTTACAGAGT CACAGTTGGT CAATGGGCCA CTTGAAGAAC TTAAGAATCT TTCTAGTCTA GCCAACAAGA CTTCTGCCTT GTTTATGATT GGAGGTGGCC ATTTTGCAGG TGCCATTATT TCGCATACTC CCATGAATAT AAAGGGGAAT GCCAAAAACT TCCTGGAAAG CAGAGAAGAA CAAGCTGTAA ATGTCGTAGT TTCCAAGACC TTCCATAGAT ACACCACCAG AAGGAAGCAG GGTGGCTCGC AAAGTGCCAG TGACAATGCT AGAGGAAAAG CCAACTCTGC CGGTTCCAGT ATCAGACGTT ATAATGAGCA GGCTTTGATT AAAGAAGTTA GAGAGTTGCT CGTGGAATGG AAGTCCTATT TAGACAAATG TTCTACTATT TATATCAGAG CCAATGGGGC AAGTAACAGA AAAATTTTGG TAGGTTATGA AGGATGTGTT CTCAGAAATG AGGATTCTCG TTTGAGATCG TTTCCTTTCA CTACAAAGAG AGCTACGACT TCCGAATTGA AAAGGGCTTG GGTTGAATTG ACTTATTTAG CCGTTGCTGA TCTTCCCAAA GTCCAGAAGA AAATTGCTAA GGAGAGATCT GCTACTCCTT CAAATATAGA CGATGAAAAG GATGACCGAA CTCCTGAACA AATTGAAGAT GAAGATCGCA CAAAAGAGTT GATAGTACTA TTGAAGAAAC AAAAGGCTCC CAAAATGATT AGTTACTTGA AACAGAACAA GATCGATGTG AATGCCTTTA AACTTTCACC AGAAATCAAA TACGCCAATT ATCCTACACT TTTGCACTAC GCTTCAGCAA ATGGATTGCT GCATATGGTC CTGGTCTTAC TTGTTAGTTC ACAAGCAGAT CCAACTATTC GAAACAAATT CGACAAGACA GCAGCAGAAA TAGCCAGCGA TGAGAATACA AGAAGAGCTT TCCAAACAGC AAGACTAAAA CTAGGCGAAG ACCGCTGGGA TTGGACTTCC AGTAAAGTTG CTGAAGCAAA ATCAAAGGAA GACTTTGAAA AAGAAGACGA GCTAGAGGAC GAAAGAATCA AGGCTGAAAA ACAGAATTTG ATCAAAGAAC AGCTCGCACA GAAGACAGAG TTTGAATTGA AACAACCCAA ATTCTCGTCA GGTGGAAGAC TCGGTATTTC CACCAATATA GCAAGCGACT TATCTGGTCT CTCTGGCGAA CAGAAGAACA GAATCTTGAG AGAGCAAAGG GCCAGAGCAG CAGAAGCCAG ATTCAAAAAG TTACAGAGCA GCTAA
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Protein sequence | MSTLNKSDRY IYNLEPRTLE SLELLYFDSA TSEICKPVHD ENEIRSSFRS LSISSESTTF IPKQNQDTSY YKSDLYRYNL KRSLNNLEPL SEGQFEELLE KQSIESLSGS ESESDEGEAN EESKKVESLM KNLTVQSQTQ YPQEEEQEST VSFMNTKNPY ILFGSSLLPQ GKAFGIYKSL FTESQLVNGP LEELKNLSSL ANKTSALFMI GGGHFAGAII SHTPMNIKGN AKNFSESREE QAVNVVVSKT FHRYTTRRKQ GGSQSASDNA RGKANSAGSS IRRYNEQALI KEVRELLVEW KSYLDKCSTI YIRANGASNR KILVGYEGCV LRNEDSRLRS FPFTTKRATT SELKRAWVEL TYLAVADLPK VQKKIAKERS ATPSNIDDEK DDRTPEQIED EDRTKELIVL LKKQKAPKMI SYLKQNKIDV NAFKLSPEIK YANYPTLLHY ASANGLSHMV SVLLVSSQAD PTIRNKFDKT AAEIASDENT RRAFQTARLK LGEDRWDWTS SKVAEAKSKE DFEKEDELED ERIKAEKQNL IKEQLAQKTE FELKQPKFSS GGRLGISTNI ASDLSGLSGE QKNRILREQR ARAAEARFKK LQSS
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