Gene PICST_60913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_60913 
Symbol 
ID4839550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1382905 
End bp1384719 
Gene Length1815 bp 
Protein Length604 aa 
Translation table12 
GC content41% 
IMG OID640390865 
Producthypothetical conserved protein 
Protein accessionXP_001384952 
Protein GI150865642 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.519825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00460496 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTACAC TCAACAAACT GGATAGATAC ATCTATAACC TAGAGCCCAG GACTTTAGAG 
TCATTGGAGT TGCTATACTT TGATTCAGCG ACTTCTGAAA TTTGCAAACC GGTCCACGAC
GAAAACGAGA TCAGATCCTC GTTTAGAAGC CTCAGCATTT CATCTGAATC AACTACTTTC
ATTCCAAAAC AGAACCAGGA CACTTCGTAC TACAAATCTG ATTTATACAG ATACAATTTG
AAACGCTCGC TCAATAACCT CGAGCCTCTT TCCGAGGGCC AGTTCGAGGA GTTGTTGGAG
AAGCAGTCGA TTGAGAGTTT ATCTGGCTCA GAGTCTGAAT CAGATGAAGG CGAAGCAAAT
GAAGAGAGTA AAAAAGTAGA ATCGTTAATG AAGAACTTAA CTGTACAATC TCAGACCCAG
TATCCGCAAG AAGAGGAACA AGAATCCACC GTGAGTTTCA TGAATACCAA GAATCCATAC
ATATTGTTTG GGTCTTCATT ACTACCACAA GGGAAAGCCT TTGGAATCTA TAAGTCTCTC
TTTACAGAGT CACAGTTGGT CAATGGGCCA CTTGAAGAAC TTAAGAATCT TTCTAGTCTA
GCCAACAAGA CTTCTGCCTT GTTTATGATT GGAGGTGGCC ATTTTGCAGG TGCCATTATT
TCGCATACTC CCATGAATAT AAAGGGGAAT GCCAAAAACT TCCTGGAAAG CAGAGAAGAA
CAAGCTGTAA ATGTCGTAGT TTCCAAGACC TTCCATAGAT ACACCACCAG AAGGAAGCAG
GGTGGCTCGC AAAGTGCCAG TGACAATGCT AGAGGAAAAG CCAACTCTGC CGGTTCCAGT
ATCAGACGTT ATAATGAGCA GGCTTTGATT AAAGAAGTTA GAGAGTTGCT CGTGGAATGG
AAGTCCTATT TAGACAAATG TTCTACTATT TATATCAGAG CCAATGGGGC AAGTAACAGA
AAAATTTTGG TAGGTTATGA AGGATGTGTT CTCAGAAATG AGGATTCTCG TTTGAGATCG
TTTCCTTTCA CTACAAAGAG AGCTACGACT TCCGAATTGA AAAGGGCTTG GGTTGAATTG
ACTTATTTAG CCGTTGCTGA TCTTCCCAAA GTCCAGAAGA AAATTGCTAA GGAGAGATCT
GCTACTCCTT CAAATATAGA CGATGAAAAG GATGACCGAA CTCCTGAACA AATTGAAGAT
GAAGATCGCA CAAAAGAGTT GATAGTACTA TTGAAGAAAC AAAAGGCTCC CAAAATGATT
AGTTACTTGA AACAGAACAA GATCGATGTG AATGCCTTTA AACTTTCACC AGAAATCAAA
TACGCCAATT ATCCTACACT TTTGCACTAC GCTTCAGCAA ATGGATTGCT GCATATGGTC
CTGGTCTTAC TTGTTAGTTC ACAAGCAGAT CCAACTATTC GAAACAAATT CGACAAGACA
GCAGCAGAAA TAGCCAGCGA TGAGAATACA AGAAGAGCTT TCCAAACAGC AAGACTAAAA
CTAGGCGAAG ACCGCTGGGA TTGGACTTCC AGTAAAGTTG CTGAAGCAAA ATCAAAGGAA
GACTTTGAAA AAGAAGACGA GCTAGAGGAC GAAAGAATCA AGGCTGAAAA ACAGAATTTG
ATCAAAGAAC AGCTCGCACA GAAGACAGAG TTTGAATTGA AACAACCCAA ATTCTCGTCA
GGTGGAAGAC TCGGTATTTC CACCAATATA GCAAGCGACT TATCTGGTCT CTCTGGCGAA
CAGAAGAACA GAATCTTGAG AGAGCAAAGG GCCAGAGCAG CAGAAGCCAG ATTCAAAAAG
TTACAGAGCA GCTAA
 
Protein sequence
MSTLNKSDRY IYNLEPRTLE SLELLYFDSA TSEICKPVHD ENEIRSSFRS LSISSESTTF 
IPKQNQDTSY YKSDLYRYNL KRSLNNLEPL SEGQFEELLE KQSIESLSGS ESESDEGEAN
EESKKVESLM KNLTVQSQTQ YPQEEEQEST VSFMNTKNPY ILFGSSLLPQ GKAFGIYKSL
FTESQLVNGP LEELKNLSSL ANKTSALFMI GGGHFAGAII SHTPMNIKGN AKNFSESREE
QAVNVVVSKT FHRYTTRRKQ GGSQSASDNA RGKANSAGSS IRRYNEQALI KEVRELLVEW
KSYLDKCSTI YIRANGASNR KILVGYEGCV LRNEDSRLRS FPFTTKRATT SELKRAWVEL
TYLAVADLPK VQKKIAKERS ATPSNIDDEK DDRTPEQIED EDRTKELIVL LKKQKAPKMI
SYLKQNKIDV NAFKLSPEIK YANYPTLLHY ASANGLSHMV SVLLVSSQAD PTIRNKFDKT
AAEIASDENT RRAFQTARLK LGEDRWDWTS SKVAEAKSKE DFEKEDELED ERIKAEKQNL
IKEQLAQKTE FELKQPKFSS GGRLGISTNI ASDLSGLSGE QKNRILREQR ARAAEARFKK
LQSS