| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_60441 |
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| Symbol | TPS3 |
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| ID | 4839530 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1414117 |
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| End bp | 1417595 |
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| Gene Length | 3479 bp |
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| Protein Length | 1108 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640390845 |
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| Product | alpha,alpha-trehalose-phosphate synthase, regulatory subunit |
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| Protein accession | XP_001385275 |
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| Protein GI | 150865883 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGA TTATCGGGTC TTTGTAAGTA TCTCCAGCAT TTTTGCACCT ACAGGCGTGG
GACTGATCTG ATGTCTTTGT ACGAGAAGAC TTTTCGGTGC AATTGGCGAC GAGGATCGCA
CACAGACTGC CCACGCTGGT AGAGATTTTT ACCCCAGATT ACTAACTTTC TCCAGGTTTC
TTCCATACAC CGTTCAGTTC GAGGTTGGGC CCCAGTTTGA CTACAACGGC GTAGACCTCA
AGGAGGCTAC GCCAGTACCG GGGTCCGCAG CTGAGATGCG TGACACCAGT CGATTTCAAT
CGGTGCTGAC TCCAATTCCC ATATCCTTAT CCTTAACTTC GGGGCAAACC AGTCTGATTC
TACCTTCTCT CAGTAAAGCC AATTCGACGC TGCACACACC ACTTCTGCTG CTGCCGAGAC
ATGGAGATGC GTCCAAATAC AGTTTGAACG AGAACGACGT CAATGGCTTT GAAGACTTCT
TCTATAACAG CCAGAAATGG CACAAATCAC ATGTTCAGCT AGAAGAAAGC TTGAAGGAGA
AGCTTCTGCC CCATTACATC CAACCAAGAT CACGTTATCT GCACCTAAAC TACCCGAGCT
CGTCCGTTGT CGTAGATATA AAGAAACAGC AACAGCACGA TGAAGAAATG GGCAGAACAG
GGTTGAAAAT CAACCGCTCC ACGACCAATT TAGTTGATCT GAACTCAGCT ACTTCTCTTT
CGGCTCTTAG TAAAGCCGCC ACAGGAGCCT CTGCGTCTTC AGTAGGAGCA GGTAAACTTC
GCGCGAGGTC GTCGTTGAAC AGAGCTCCTC CCACCTTCAC ACTACATTCC AATAGCAGCA
CCAATTCTCT AGCTATAGCC GAGGAACAAG AAGAACAAAA ACAAGAAGTC AATGAAGCTC
CTATTGAGGA TGTCTTCGAC CAGGACTTTT ACATTCTGAA TAGAAGAGAA ACAAAGTTGG
CACCGTTTGG AGGCTTTTCC AACCCAGATA TAGAGGGAAT GCTCTTCAAC CAGGAAAGCA
TCTTTGAGAG TGCACCGTGG AAAGTCGTAT TCGCTCAGAA GGGAAACGTT TCGTTGACAA
AGGCAGTGAA ACTCTCGGTT GAGGATGGTG TAATCCACAA TAACAAATGG GTAGGAACCC
TAGCGATGCC TAGTGATTCC ATTCCCAAAC ACGTAATTGA CGACATAGCC GAATCTCTCA
GTAACAACTA CGACTCTGAA GCAGTATTCC CTAACGATAT TACGTTCCAG GGACATTACA
AGTCATTTTG TAAACAAATT TTGTGGCCCA CTTTCCACTA TCAGATCCCT GATGATCCCA
AGTCCAAAGC TTTTGAAGAC CATTCTTGGA GCCATTACAA ACTCCTCAAT CAACTCGTAG
CAGATAAAAT CGTAGAAGTA TATAAGAAAG AAAACGGCGA AGACGCTGAT CCCGCAGACC
CAGAGAATCT CATCTGGATT CACGACTACC ACTTGTTGTT GGTTCCATTG ATGATCCGAC
AGAAGCTTCC AAATGCAAAG ATAGGCTTGT TTCTCCATAT ATCTTTTCCC TCTTCTGAGG
TTTTTAGATG CTTTGCCCAA CGTACTGAAA TTCTTCGAGG AATGCTAGGA GCCAACTGTA
TCTCGTTCCA GACGGAAGAG TATGTGAGAC ACTTTTTGCA AACCTGCAAC CGATTACTAT
TAGCAGATAC AAACGAATAC GGTATCTCGT ACGACGGAAA CTTGACTATG ATAAATACCA
TTCCAGTGGG TATAGATGCA GCTTCTCTAA GCGATGTAGT AGAAAGCGAA GACGTTAAAG
AATGGCGTCT GCTTATTCGA GATCGCTGGG GAGGCCAGAA CTTAATAGTA AGCAGGGACA
AGCTAGACAA GCTACGTGGT ATCAAACAGA AATTGCTAGC CTACGAGATG TTCTTGACAA
ACAATCCAGA ATACATTGAT ACCACAGTGT TGATTCAGAT CTGTAATGGA TCAGCTAATG
ACTCTGAGTA CGAGTCTGAA ATTAACCAGA TAGTCGCTAG AATCAACAGT CTTCCTGACA
ATATCTCAAT GTCTCGACCT GTTGTATTGC TTCAAAAAGA TATCGAATTC AACCAGTATG
TAGCTCTTCA GAGTGAAGCA GAGGTCTTTG TGGTGTCGTC AATGAGGGAA GGCTTGAACT
TAACCTGTCA CGAGTTCATC ACCTCTACGA GCGAGAAGAA CTCACCATTG ATCTTATCTG
AATTCACCGG TTCTGCTTCT TTGCTCAATT GTAATGGGAA GGGTTCTCTT TTGATCAATC
CCTGGGACAT TAAGAAGTTC TCAGAAACGT TCAAACGCCT GTTAACAATG GATAAGAAGG
AAAAACTCAT GAGATGGCAA AACTGTTTTG AGGTTGTCTT GACTAGAGAT TCCAGACATT
GGGTTCAGAG TTGTCTCCAG AGTATAAATG AAGCCTGGGA AAGAGACTAC AAGAAGAATT
CTACAAGTTT AAAAAGATTT ACCAAACAAG CGTTTGAAAA ATTCTACAGG GACGGCAAGA
AAGGGAGAAG ACTCTTTTTC TTGAATCTCG AGACTCCTGT CGCAACAGCC AATCCTTCTC
ATCCTAACGC ACATGCTGCC GTAGCAGCAG CAGGCAAGAA CTCTTTCAGT GTTCCAGCTA
CTGTTCATGC TTTCATGAGC GATATCTTGG AAGACCCTCG TAATGGTGTA TATTTAATGA
GTTACTTAAA GAAGAAAGAC TTGGATAGTC TCTACAGAAG ATATCCCAAG TTGGGTTTAA
TTGCTGAAAA TGGAGGTTAC ATAAAACTTA TAGGATCCAG CAAATGGATC TCTACTGTTG
ATGAGTCGGA ACTTCAAAGT TGGATGTCAC AAGTGAAACA GTTGATCGAT TCGAAAGTCG
AAAGGTTGCC GGGTTCCTAC TGTGAAGTTG AAGATTGTAC AATCAGATTT CACACTGGTC
GTGCATTTAT AGAAGACAGG GAAAGAACTA TAGACACAGT GGGAGACACC ATCCAATATA
TCAACAGCTT GTTCCAAGAA CAGGATGATG TACATGCTAC TTTAATAAGG AATGTTGTTG
TTGTGCAAAA AAACCAATTA TCGCTCAAGG CCCTCAAGTT CATTATATCG TACTACAATC
AAATGAAGTC AGGAGTAGAT CCAGAAACAC TAATCAAAGA ATACAGAGTC AAGCAGGTCT
CACCGACAGC AATGCCAACC ACTCCAGACA GAAGTTACGA ACAGTTGCTT CCACTACTTT
CCCCTAATAG TGGAAGGTCG CAGAAGGGTG TAACTTCCAT ATTCTTTTCT GGAGGATCTA
CACCTATCGA TGAGCCCAGT TACGAGTACA TTAACTTCTT GAAAGATGTG GGTGAACTCG
ACAATGCTTT GGCAGTTGTC GTATTGGGGG CAGATTCGGA TGTCAAGACC TCCGCTACTC
ATGCTGCCAG AGGTAAAAAC GAGCTTTTAG GCATTTTATC AAAGGCTACG TTGCGTTAA
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| Protein sequence | MTVIIGSLFL PYTVQFEVGP QFDYNGVDLK EATPVPGSAA EMRDTSRFQS VSTPIPISLS
LTSGQTSSIL PSLSKANSTS HTPLSSSPRH GDASKYSLNE NDVNGFEDFF YNSQKWHKSH
VQLEESLKEK LSPHYIQPRS RYSHLNYPSS SVVVDIKKQQ QHDEEMGRTG LKINRSTTNL
VDSNSATSLS ALSKAATGAS ASSVGAGKLR ARSSLNRAPP TFTLHSNSST NSLAIAEEQE
EQKQEVNEAP IEDVFDQDFY ISNRRETKLA PFGGFSNPDI EGMLFNQESI FESAPWKVVF
AQKGNVSLTK AVKLSVEDGV IHNNKWVGTL AMPSDSIPKH VIDDIAESLS NNYDSEAVFP
NDITFQGHYK SFCKQILWPT FHYQIPDDPK SKAFEDHSWS HYKLLNQLVA DKIVEVYKKE
NGEDADPADP ENLIWIHDYH LLLVPLMIRQ KLPNAKIGLF LHISFPSSEV FRCFAQRTEI
LRGMLGANCI SFQTEEYVRH FLQTCNRLLL ADTNEYGISY DGNLTMINTI PVGIDAASLS
DVVESEDVKE WRSLIRDRWG GQNLIVSRDK LDKLRGIKQK LLAYEMFLTN NPEYIDTTVL
IQICNGSAND SEYESEINQI VARINSLPDN ISMSRPVVLL QKDIEFNQYV ALQSEAEVFV
VSSMREGLNL TCHEFITSTS EKNSPLILSE FTGSASLLNC NGKGSLLINP WDIKKFSETF
KRSLTMDKKE KLMRWQNCFE VVLTRDSRHW VQSCLQSINE AWERDYKKNS TSLKRFTKQA
FEKFYRDGKK GRRLFFLNLE TPVATANPSH PNAHAAVAAA GKNSFSVPAT VHAFMSDILE
DPRNGVYLMS YLKKKDLDSL YRRYPKLGLI AENGGYIKLI GSSKWISTVD ESELQSWMSQ
VKQLIDSKVE RLPGSYCEVE DCTIRFHTGR AFIEDRERTI DTVGDTIQYI NSLFQEQDDV
HATLIRNVVV VQKNQLSLKA LKFIISYYNQ MKSGVDPETL IKEYRVKQVS PTAMPTTPDR
SYEQLLPLLS PNSGRSQKGV TSIFFSGGST PIDEPSYEYI NFLKDVGELD NALAVVVLGA
DSDVKTSATH AARGKNELLG ILSKATLR
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