Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_59900 |
Symbol | |
ID | 4839211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 430481 |
End bp | 431302 |
Gene Length | 822 bp |
Protein Length | 274 aa |
Translation table | 12 |
GC content | 37% |
IMG OID | 640390526 |
Product | predicted protein |
Protein accession | XP_001384745 |
Protein GI | 150865503 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.787504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTAGTTAGTG GATTCTTTTT TCAGGGCATA GGTATTGGAA TCTGTTTCTC TCAGTTCAAT GTTTTCATGA GTCGTTTACA AAACAGCCCC CTTGCTATCG GTCTCTTCCA TGGGAGCTGG GGGTTGGGTG CCTCGACGTC TCCTCTTATT GCTACTGGTT TAGTGGAAGC TGGAATTAAA TGGAATATGT TCTATCTTAT ACTTCTTGGG TTTCTGATCT TCAATATTGC CAACTGTTAT TTGGCTTTCG TTCACTGGGA AAGTTCTTTG ACACCCTGGG ATCCCAAAGT TAAGAAGACC GATGAAATAG AAGAAAACCT TTCAAAATTA GACGGGTTGA TGGCGGAAGC TGTAAGAACC AAAATGACCT GTTGGGCATC TTTGTTTGTG TTTTGTTATC AAGGTGCTGA AGTTTCGTTT GGAGGCTGGT TAACTACCTA TCTACGTGAT TATAGAATGT TTACATCCAC TTCCATTTCA TACGTTGCTA CATGTTATTG GTTTGGAATC ACATTAAGTA GATTGGTAGT TACTACTTTT ATTCACAGAA AGATAGGAAT TCCCAGAGCA AATTTTTTAT TGGCTACTCT TGCTATCGTT TTTGTTCTCT TGACTTGGTT AATTGATAAT TTGATCTCTG AGATTGTTAC CATATTTATC AGTGGGATAT GTATTGGGCC TATCTATCCA TTAATGATTA GTCATGTTAT TCAGGGAAAT TTATTGCCTG ATAGAATACA GATAATTTCA ATGACAATTT CATCAGCCTT TGGATATTCT GGTGGTGCAG TTTTTCCATT TCTTATTGGG TTGATTTCTC AA
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Protein sequence | LVSGFFFQGI GIGICFSQFN VFMSRLQNSP LAIGLFHGSW GLGASTSPLI ATGLVEAGIK WNMFYLILLG FSIFNIANCY LAFVHWESSL TPWDPKVKKT DEIEENLSKL DGLMAEAVRT KMTCWASLFV FCYQGAEVSF GGWLTTYLRD YRMFTSTSIS YVATCYWFGI TLSRLVVTTF IHRKIGIPRA NFLLATLAIV FVLLTWLIDN LISEIVTIFI SGICIGPIYP LMISHVIQGN LLPDRIQIIS MTISSAFGYS GGAVFPFLIG LISQ
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