Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_59787 |
Symbol | CIC1 |
ID | 4839690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 173454 |
End bp | 174443 |
Gene Length | 990 bp |
Protein Length | 330 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640391005 |
Product | protease substrate recruitment factor |
Protein accession | XP_001384689 |
Protein GI | 126136331 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGAA CGAGATCCAG GGGCTTAGAC TCTCCAAGAA CACCAGTCTC TGCCAAAAGC AAGAAGGTAG GAGCCATAAA ATCGAGCTCT GCTACCTCAT CTCCTACAGC AGAAAAAGTT AAAAAGATCA CAGCAAAAAG AGCCAAGGCA CAAGCAACCG AAGAAAAGGT TGAAGAATCC AAACCTGCAG CCTCTAAGTT GTCTACCAGC ACTGTTAGCA GCGAGATCGT CTCTTCTAAA GTGGCATCAA AGGCTATTTC TGAGTTGTCT AAGTTCTTAA AGAGAGAAGA ATCCAAGAGC AAAGACACTA AATCGACAGG CTTGTTTGAC GAATCTGACG AAGACGAAAA GAAAAACTTG TATTTACAGA TTCATACTAA GAAGTTTTTC TCAGAAAAGC CTCAGTTCAA GCCCAAGTTA ATAAAATTGA CCAAATCCAT CTATGACCAG ACGAGCTTGA AGACTTGTTT GATTGTCAGA GATCAATTGG CCACTACCAC AGAACAAATC GAGGCTCTCG AGAACGCCAG TTTGCCCACT GTTTCACAGA TTCTCCCATT GAAGTCGTTG AAGGCTGAAT TCAAGAACTT TGAAAAACGT CGTCAATTTC ATGCTGACTA TGACTTGTTC CTTGTAGACG ATGCCTTGTT GAACTTGATG CCTACATTGT TGGGAAAGAT TTTCTACGGA AACGGTAGCA ACAAGATCCC ATTGCCTATC AGAGTCACCA CCTCGAGTAA CACCAAGGAA ATCTCCATTG TCACCATCAA GAACCAAGTT GAAAAATGCC TTCAGTCCAC ATACTACTTG CCACCTATGG GTGTCAACGT CTCTATTAAG ATCGGATCGG TCAATTCCAC CTTCAGCGAA GAAGAATTGA GCCAAAACTT GCAAGATGCC TTGTCTTTGT TTGAAAAGGA TACCTTGAGA AGTGTGAACT TGAAGACGAC TGCATCTCCC TCGTTGCCAT TGTTTTACGC AGAAAAGTTG
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Protein sequence | MARTRSRGLD SPRTPVSAKS KKVGAIKSSS ATSSPTAEKV KKITAKRAKA QATEEKVEES KPAASKLSTS TVSSEIVSSK VASKAISELS KFLKREESKS KDTKSTGLFD ESDEDEKKNL YLQIHTKKFF SEKPQFKPKL IKLTKSIYDQ TSLKTCLIVR DQLATTTEQI EALENASLPT VSQILPLKSL KAEFKNFEKR RQFHADYDLF LVDDALLNLM PTLLGKIFYG NGSNKIPLPI RVTTSSNTKE ISIVTIKNQV EKCLQSTYYL PPMGVNVSIK IGSVNSTFSE EELSQNLQDA LSLFEKDTLR SVNLKTTASP SLPLFYAEKL
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