Gene PICST_59787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_59787 
SymbolCIC1 
ID4839690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp173454 
End bp174443 
Gene Length990 bp 
Protein Length330 aa 
Translation table12 
GC content43% 
IMG OID640391005 
Productprotease substrate recruitment factor 
Protein accessionXP_001384689 
Protein GI126136331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAA CGAGATCCAG GGGCTTAGAC TCTCCAAGAA CACCAGTCTC TGCCAAAAGC 
AAGAAGGTAG GAGCCATAAA ATCGAGCTCT GCTACCTCAT CTCCTACAGC AGAAAAAGTT
AAAAAGATCA CAGCAAAAAG AGCCAAGGCA CAAGCAACCG AAGAAAAGGT TGAAGAATCC
AAACCTGCAG CCTCTAAGTT GTCTACCAGC ACTGTTAGCA GCGAGATCGT CTCTTCTAAA
GTGGCATCAA AGGCTATTTC TGAGTTGTCT AAGTTCTTAA AGAGAGAAGA ATCCAAGAGC
AAAGACACTA AATCGACAGG CTTGTTTGAC GAATCTGACG AAGACGAAAA GAAAAACTTG
TATTTACAGA TTCATACTAA GAAGTTTTTC TCAGAAAAGC CTCAGTTCAA GCCCAAGTTA
ATAAAATTGA CCAAATCCAT CTATGACCAG ACGAGCTTGA AGACTTGTTT GATTGTCAGA
GATCAATTGG CCACTACCAC AGAACAAATC GAGGCTCTCG AGAACGCCAG TTTGCCCACT
GTTTCACAGA TTCTCCCATT GAAGTCGTTG AAGGCTGAAT TCAAGAACTT TGAAAAACGT
CGTCAATTTC ATGCTGACTA TGACTTGTTC CTTGTAGACG ATGCCTTGTT GAACTTGATG
CCTACATTGT TGGGAAAGAT TTTCTACGGA AACGGTAGCA ACAAGATCCC ATTGCCTATC
AGAGTCACCA CCTCGAGTAA CACCAAGGAA ATCTCCATTG TCACCATCAA GAACCAAGTT
GAAAAATGCC TTCAGTCCAC ATACTACTTG CCACCTATGG GTGTCAACGT CTCTATTAAG
ATCGGATCGG TCAATTCCAC CTTCAGCGAA GAAGAATTGA GCCAAAACTT GCAAGATGCC
TTGTCTTTGT TTGAAAAGGA TACCTTGAGA AGTGTGAACT TGAAGACGAC TGCATCTCCC
TCGTTGCCAT TGTTTTACGC AGAAAAGTTG
 
Protein sequence
MARTRSRGLD SPRTPVSAKS KKVGAIKSSS ATSSPTAEKV KKITAKRAKA QATEEKVEES 
KPAASKLSTS TVSSEIVSSK VASKAISELS KFLKREESKS KDTKSTGLFD ESDEDEKKNL
YLQIHTKKFF SEKPQFKPKL IKLTKSIYDQ TSLKTCLIVR DQLATTTEQI EALENASLPT
VSQILPLKSL KAEFKNFEKR RQFHADYDLF LVDDALLNLM PTLLGKIFYG NGSNKIPLPI
RVTTSSNTKE ISIVTIKNQV EKCLQSTYYL PPMGVNVSIK IGSVNSTFSE EELSQNLQDA
LSLFEKDTLR SVNLKTTASP SLPLFYAEKL