| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_59451 |
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| Symbol | SMC2 |
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| ID | 4838712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1315686 |
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| End bp | 1319201 |
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| Gene Length | 3516 bp |
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| Protein Length | 1171 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640390027 |
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| Product | Chromosome segregation and condensation |
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| Protein accession | XP_001384551 |
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| Protein GI | 150865365 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.819288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000261165 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGGTCG ACGAGTTGAT CATCGACGGG TTCAAGTCGT ATGCAACGCG TACGGTGATT
TCCGGCTGGG ATGGCCAGTT CAATGCCATA ACAGGACTTA ACGGTTCTGG AAAGTCCAAC
ATCTTGGATG CCATCTGTTT CGTATTGGGT ATTGCTTCCA TGGCAACAGT GAGAGCGTCA
AACTTGCAAG ATTTGATCTA TAAAAGAGGC CAGGCTGGTG TGACAAAAGC CAGTGTCACT
ATAGTATTTG ACAATTCTGA AGTCCTGAAA TCACCCATAG GCTTTGAAAA TTGTTCTACT
ATTTCAGTTA CAAGACAAAT CATATTAGGT GGAAGTTCCA AGTATTTGAT CAATGGTCAC
AAAGCGCAGC AGCAGACAGT GCTCAACTTG TTTCAATCTG TTCAATTGAA CATCAACAAC
CCCAACTTCT TGATTATGCA AGGTAAGATT ACCAAAGTGT TGAACATGAA ACCCACTGAG
ATCTTGTCGT TGATTGAAGA AGCCTCAGGA ACACGAACTT TTGAAGAGAG AAAAGACAAG
GCACAAAAGA CAATGGCGAA GAAGGAGGCT AAACTCACAG AGATTCGTAG TTTGCTCAAG
GAAGAAATCG ATCCCAAGCT CGAAAAGTTG CGGAATGAGA AAAGATCTTT TTTGGAGTAC
CAACAGACAC AAACAGACCT CGAGAAGTTG TCAAGGATCA TTGCTGCACA TGACTACACC
AAATTATCAC ATTCTTTCAC CAACTACTCG AATTCTTTGA GCGAGCATGA GTCCCGTATG
GCAGCTCTTA CTAGTGAAAT TGACAAGTTA GGCAACGAAA TAAAGAATTT GAACGACGAT
TTGACACATG TGCGAAAGCA GCGTGAAGCA GAGTTGAATA ATGAAGGAAA GCTCAAAGAA
TTGGAGCTGC AAGAAGCTCG TCTATCCACA GAGATTACCC GTCTCAACAC TTCCAAAGAA
ATTGCCCACG ATAACTTGAA AGACGAACAA AATAAGAAGC AGAAACTTGA AAATCAAATC
GCAGAGATAC AATCAAACTT GGAAAACAAC TCTGATACGT ACAATAGTGT TAAAAATGAT
TTTGATAATG CAACTGAACA GCTCCAGAAG TTGAAAGAAG AATACACCAA GAAGGATGAG
TTGTTATCGA CATTGTCTAC TGGTGTTTCA GCAACTGGTG ATATGAGCAC AGGCTATTCG
GCTCAACTCA AAGAGTTCAA GACCAAACTA AATACATCTC AGAACTTCAT CAAGACGTCC
AAGTTGAAGA TAGCACACCT TGAGAGTCAA ATATCAAACG ACAAGAAAAA ACTTGTTCAG
GCCAAGGCCG AAAACCAGAA CATTTTATCC GACATGGAAG CATACAGATC TGACATCGCA
GCGATGGAGC AAGAGGTAAG CAGTAAATTA GGATTCGACC CAAGCGTCAT AGCCGAACTT
AAACTGCAAG AAAAGCAATT TCACAACGAT GCGTACAAGC TTAACGGTGA ATTAAACCAC
ATGAAGAGAG AAATAGGAAA CATCGATTTC CAATATTCCA GACCTTCAGC AAACTTCAAT
GACAGTTTGG TACGAGGCAT AGTCGCTCAG CTTTTTGAGT TGCCTGAAAC TTCTAATGAT
AAGGCTTTGG CTTTGCAGGT TTGCGCTGGT GGGAGACTTT ATAATGTCGT CGTAGAAAAC
TCCGAAGTTG CTACTCAGCT TTTGGAAAGA GGTCAATTAA AGAGAAGAGT AACCATTATA
CCTCTTGATA AGATCCACGC TAGTTCAATT GATCCACGCA CTGTTGATTA CGCCAAGAAA
CTCGCTCCAA ACAAAGTGGA GTTGGCCATT AACCTTATAG AGTTCCAGGA CGAGTTGGTC
AAGGCAATGG AATATATTTT TGGAACGACA TTTGTGTGTA ACGATCCCAA TACAGCTAAG
ACTATCACTT TTGATCCCAA GATTAGATCT AGATCAATTA CATTGGAAGG TGACGTATAC
GACCCCGAGG GAAATCTTTC AGGTGGTTCG CGTAAGAACG ATTCCTCTAT TATAATCAAG
GTACAGAGAT ACAATAAGGT ATCAAAGAGG TTATCCGAAG TGAACTATAA ATTAAACGAA
ATCAGACAAG AAATACAAAG AATGGAATCG TTGATAGAAA ACACGAAGGG CCTTCAAAAT
GAATTACTTT TGAAAAAGCA CGAGTTATCC TTATTAGAAA GAAAATTGGA AAACAACCCT
TCTTCTGTGA TTCTAAAGCA GAACCAGGCC AACGAGGCTG AAATAAGTGG ATTGCAAGAG
CAAATTCGAC AGGAAGAAAG TAACTGTCAA AATTTCGAAA AGGAAATTAA TGTCATTGAA
AAAGACATAC GTGAATTCAA CAGTGACAAG GGCTCTAAAT TGAAGGATCT TAAGAAAGAT
GTTGTCGCAT TGAAGAAAGA GGTAGAAAAG AAGCAAGTTG TGTTGGATAA ATTGACAGAT
AAATATCAGG CTATCGAAGT TGAAGGAGAA CAACAAAAGT CAGACTTGAT TCAAGCTAGG
GCTTCTCTAC AAACCACGAT TGATACTATC CAAGAATTAA CTGCTAAAAT AAGCTCCATG
GAACAAAAGG GAGCAGAGTT GAACGATACA TTAGTCATTG TCAGGGTTCA ATTAGAAGAA
GAGAAAGCAA ATTTGCTTGG TTTGGATGAA GAAATTAATG AATTGATGAA GATTATCAAA
GACAAGAATG AAAGTTTGAG CAATTCTAAA TTAGAAATGC AGAAGTTGAA CCATGAATTG
GAGAAGTCGA GTACTATCAC GAAGAATTTG AAGAATAGAC TTGACGCAAT TATCAGTGAA
AATGACTGGG TTACTGATGC TAATGTTGTA GAGAACTTGG TACAACAACA TCCAAATATC
AATTTGGACG AGGGCCGTGA CCAACTAGAG GTGCTCCAAG AAAAGTTCCA GAGCATGAAG
AGAAAGGTGA ATGTCAACAT CATGAGTATG ATTGACAATG TAGAAAAGAA GGAAGCTTCT
TTGAAACAGA TGGTCAAGAC TATTGAAAAG GATAAGAGCA AGATCGTAAA CACTATCGAG
AAATTGAATG GCTACAAGAG AGAAACTTTG AATTCGACTT ACCAGAAAGT GTCTACTGAC
TTTGGCCAGA TCTTTGCCGA TTTGTTGCCA GGATCATTTG CTAAGTTGGT ACCTAGTAAT
ATGATGGACG TTACAAAAGG TCTAGAAGTT AAAGTCAAGC TAGGAGAAGT ATGGAAAGAG
AGTTTGGTAG AGCTCTCTGG AGGTCAGAGA TCATTGATCG CGCTTTCGTT GATCATGGCA
TTGCTTCAAT TCAAGCCAGC TCCAATGTAT ATTTTAGATG AAGTTGATGC TGCCTTAGAT
TTGTCACATA CACAAAATAT TGGGCATCTT ATCAAGACGA GATTCAAGGG CTCACAGTTT
ATTGTTGTTT CCTTAAAAGA GGGGATGTTC ACCAATGCTA ACCGTTTGTT CAGAACCAGA
TTCCAGGACG GTACATCTGT AGTTTCAGCC ATGTGA
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| Protein sequence | MKVDELIIDG FKSYATRTVI SGWDGQFNAI TGLNGSGKSN ILDAICFVLG IASMATVRAS
NLQDLIYKRG QAGVTKASVT IVFDNSEVSK SPIGFENCST ISVTRQIILG GSSKYLINGH
KAQQQTVLNL FQSVQLNINN PNFLIMQGKI TKVLNMKPTE ILSLIEEASG TRTFEERKDK
AQKTMAKKEA KLTEIRSLLK EEIDPKLEKL RNEKRSFLEY QQTQTDLEKL SRIIAAHDYT
KLSHSFTNYS NSLSEHESRM AALTSEIDKL GNEIKNLNDD LTHVRKQREA ELNNEGKLKE
LESQEARLST EITRLNTSKE IAHDNLKDEQ NKKQKLENQI AEIQSNLENN SDTYNSVKND
FDNATEQLQK LKEEYTKKDE LLSTLSTGVS ATGDMSTGYS AQLKEFKTKL NTSQNFIKTS
KLKIAHLESQ ISNDKKKLVQ AKAENQNILS DMEAYRSDIA AMEQEVSSKL GFDPSVIAEL
KSQEKQFHND AYKLNGELNH MKREIGNIDF QYSRPSANFN DSLVRGIVAQ LFELPETSND
KALALQVCAG GRLYNVVVEN SEVATQLLER GQLKRRVTII PLDKIHASSI DPRTVDYAKK
LAPNKVELAI NLIEFQDELV KAMEYIFGTT FVCNDPNTAK TITFDPKIRS RSITLEGDVY
DPEGNLSGGS RKNDSSIIIK VQRYNKVSKR LSEVNYKLNE IRQEIQRMES LIENTKGLQN
ELLLKKHELS LLERKLENNP SSVILKQNQA NEAEISGLQE QIRQEESNCQ NFEKEINVIE
KDIREFNSDK GSKLKDLKKD VVALKKEVEK KQVVLDKLTD KYQAIEVEGE QQKSDLIQAR
ASLQTTIDTI QELTAKISSM EQKGAELNDT LVIVRVQLEE EKANLLGLDE EINELMKIIK
DKNESLSNSK LEMQKLNHEL EKSSTITKNL KNRLDAIISE NDWVTDANVV ENLVQQHPNI
NLDEGRDQLE VLQEKFQSMK RKVNVNIMSM IDNVEKKEAS LKQMVKTIEK DKSKIVNTIE
KLNGYKRETL NSTYQKVSTD FGQIFADLLP GSFAKLVPSN MMDVTKGLEV KVKLGEVWKE
SLVELSGGQR SLIALSLIMA LLQFKPAPMY ILDEVDAALD LSHTQNIGHL IKTRFKGSQF
IVVSLKEGMF TNANRLFRTR FQDGTSVVSA M
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