| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_58727 |
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| Symbol | |
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| ID | 4838440 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 599239 |
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| End bp | 600690 |
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| Gene Length | 1452 bp |
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| Protein Length | 475 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640389755 |
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| Product | predicted protein |
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| Protein accession | XP_001384411 |
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| Protein GI | 150865266 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0095] Lipoate-protein ligase A |
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| TIGRFAM ID | [TIGR00545] lipoyltransferase and lipoate-protein ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0291322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCTA TAATACGAAG ACGTCCAGTG CTGCAGAGAG CCATTTTAAC GACTTCTTTA
GTACGGAGAG AATTCCTTAG CAATGTCCAA GTACCGTTCC AGGATGATCT CACCTCCACA
GATTTTGATG ATTTCAACCT AGGAGACTTC CAGCACTACC AGGAGTCTCC TGATGTGATT
GCAAAGAGGT ACGAAATGAT GAATGAAACT ATACCAGAAC CAGAAAAGTC AGACAAAAAA
AGAATAACAA GCCAGCCCTA TATTTCTACA GATACTTCAA TTTCAAATCT ACAAGATTTA
GTCCAGCTCA AGGAGCCTTT GGTATTTCAG TCTAAATTGA CAAGCCCATA CTTGAATCTT
GCTATTGAGC TGTATATCTA CGACAATATG CCTAAGCCAG AAACTGACGA TATCAACTAC
AATAGGTTGA TGTTCTATGT CAACTCTCCT TGTGTAGTGA TAGGCAAGAA TCAAAATCCG
TGGAAGGAAG TCAACTTGCC TTTGCTCACA AATTTGATGA TACCACTTGT TCGTAGAAAG
TCCGGCGGAG GAACGGTAGT TCATGATCTC GGAAATATCA ACTACTCGTT CATGACAACA
AAGGAGAAAT TTGACCGATT CCAATTTGCT CACTTGGTCA GAGATGCTGT AAACTCGTCC
GGCTTTGGAA AGTACCAGCT AGAAGTAAAT GACCGTGGAG ATATCACGAC CACCAAACAA
GAAGATGGAG TCAACTACAA GATCAGTGGA TCGGCTTATA AACTCTCACG TGGAAAGTCG
TATCACCATG GAACGATGTT GTTGAATCTG AGATTAGATG TATTGGGTAA ACTTTTACAC
AGAGACGAGA ACAAATTGGG AAAAGTCGAT GCCAGCAATG TGATTAACTC GGTGAAATCA
AAAGTGTCCA ATTTGGAAAT GGAGTCAGAC AAGTTTGTAG AAGTCGTCAG CTCAGGATTC
CAAAACGTTT ATGGAACTGT TGAGCAATGC AATGTAGAAC AAGCAGAAAG TGAAGAAGAA
TTTGATCAGA ACGAATTATT TGGCTTGTCT GACTTTGTAT CTGCAAACTC GACGAAGAAT
GTTAAAAAAT TCACTATTGA CGAGATGACT GAATTGCCTT CAGCAATTGT AGAGGTAGCT
GAAGAACTCA AGACCTGGGC TTGGAGATTT GGGTCTACTC CCAAATTTAC TCACGAATTG
TATAACAACA AGCTAGGCTT TAAAGTCAAG TTTTTTGTAG GAAAAAATGC AAAGGTTGAA
GGTTTCGAAT TGTCATTTAT GAATTTTACA GAAAGACCTA TCTCAGAAGC AAAAATCAGA
GACAGTTTTG AGTATTTGGA AACTTTCATT AAAGATAACA ACTTGGAGTA CACTGGCTCT
AATGTTGCTG GATTTATCAC CAATGATATC ATTTCGGACT GGGTTGGCGA GTCTATTGAT
GGGACAGTGT AG
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| Protein sequence | MFSIIRRRPV SQRAILTTSL VRREFLSNVQ VPFQDDLTST DFDDFNLGDF QHYQESPDVI
AKRYEMMNET IPEPENQPYI STDTSISNLQ DLVQLKEPLV FQSKLTSPYL NLAIESYIYD
NMPKPETDDI NYNRLMFYVN SPCVVIGKNQ NPWKEVNLPL LTNLMIPLVR RKSGGGTVVH
DLGNINYSFM TTKEKFDRFQ FAHLVRDAVN SSGFGKYQLE VNDRGDITTT KQEDGVNYKI
SGSAYKLSRG KSYHHGTMLL NSRLDVLGKL LHRDENKLGK VDASNVINSV KSKVSNLEME
SDKFVEVVSS GFQNVYGTVE QCNVEQAESE EEFDQNELFG LSDFVSANST KNVKKFTIDE
MTELPSAIVE VAEELKTWAW RFGSTPKFTH ELYNNKLGFK VKFFVGKNAK VEGFELSFMN
FTERPISEAK IRDSFEYLET FIKDNNLEYT GSNVAGFITN DIISDWVGES IDGTV
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