Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_58562 |
Symbol | |
ID | 4838956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 445622 |
End bp | 446461 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640390271 |
Product | predicted protein |
Protein accession | XP_001384044 |
Protein GI | 150865001 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2890] Methylase of polypeptide chain release factors |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0813846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.776229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GAAGAAGCTC AGGATGACGA CTTTGCCATT GATCCAGATG ACGAATTGCT CATGCATACT TACCATACTT TACCGGACAA TTGTAAAAAG TTTTGGGGAA GAAGGTATGA CTTGTTTGGT AGGTTTGATG AAGGAATCTA TATGACATCT GAGCTTTGGT ATTCGGTAAC GCCAGAATCA ATAGCAGTCT TTGTAGCCCG GCTTTTCAAG TATCTCATTC CCGATGCTAA AAGTGCCATG GACGTCTGCT GTGGTGGAGG TGGAAACACC ATCCATTTTG CCAAGTACTT TGATTCTGTT GTTGCTGTAG ATATAAATGC AATTAATGTC AAGTGTACTG AACACAATGC TCAGATCTAC GGTGTGGGTA GCAAAATAGA TACAGTTGTT GGGGACTGGA ACGAATTGAG TAGAGTTGAG GTAGATGGCT TGCCGAATCA GAACTGGATT CCACAACATT TACGAAATAA AGAGTTTCCA CAAAAGACGT TTGATTTCAT CTTTTCATCG CCTCCATGGG GAGGAACTTC GTACGATAAG AAAGATAACG AGTTCGACTT GTACACTATG GAACCGTTTC CCATCGACAA GATGGTCAAG CAGTTTCTAC AGTATACCGA GAATATCGGG TTGTTCTTGC CCAAGAGTCT GAATTTGAAC CAAATTGCAC AAGTAACTCG TGAGGTTTAC GGAGTTGAGG GAAAGTGCCG GGTTATCTAT ATATATAGAA AATCATTTCT TACGGGTATA GTGGCATTGA TGGGGCCAGG AGTGACGGGA GCATTGGACT ATGAGGAGCT ATTTGGGGCA GAAGAAGAGT ATAGAGAAGA TGAAGTTTAA
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Protein sequence | EEAQDDDFAI DPDDELLMHT YHTLPDNCKK FWGRRYDLFG RFDEGIYMTS ELWYSVTPES IAVFVARLFK YLIPDAKSAM DVCCGGGGNT IHFAKYFDSV VAVDINAINV KCTEHNAQIY GVGSKIDTVV GDWNELSRVE VDGLPNQNWI PQHLRNKEFP QKTFDFIFSS PPWGGTSYDK KDNEFDLYTM EPFPIDKMVK QFLQYTENIG LFLPKSSNLN QIAQVTREVY GVEGKCRVIY IYRKSFLTGI VALMGPGVTG ALDYEELFGA EEEYREDEV
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