| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_58102 |
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| Symbol | VMA5 |
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| ID | 4838371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1009512 |
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| End bp | 1010633 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640389686 |
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| Product | Vacuolar ATP synthase subunit C (V-ATPase C subunit) (Vacuolar proton pump C subunit) (V-ATPase 42 kDa subunit) |
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| Protein accession | XP_001384502 |
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| Protein GI | 150865333 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5127] Vacuolar H+-ATPase V1 sector, subunit C |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.143642 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTGCAA TTGCTAATTA TTTGGTTCTT TCGTTGCCTC AATCTACCAA TGCCCATGAC
TGGTTGACCC AGGAGTTGAT TGGTGGAAAG GCACCTTTGT ACAAGATCAA ATTGCCAGAC
TTCCAGAGCG GTACTTTGGA CTCGTTGGTG CAAGAAAGTG ACGAGTTGTC CAAATACGAT
CAACAATTGT CCGCATCTGT TTCCAAGGTG ATTGACATCT TGAGCACTGT AACTGAATCG
GATTCTACAT CCAGAGTGGT CAACTCAAAA CAAGCTACCG ACTTCATTCA ATCATTCACC
TGGAACACCA CCAAGTACAG ATTAGATAAG CCTATAAACC AGTTGGTAAA GATACTTTCC
AACGAAGCTC TCACATTGGA TAATGATGTG AGAACTTCGT ACCAGAATTA CCAGGCTGCT
AAGTCGAACT TCTTAGCAGC TGACAGAAAG AAGAATGGTG ATTTATCCAT CAAGTCGTTG
CACGAGATCG TCAGGCCGGA ACAATTCGTG TTGGACTCCG AACATTTGGC TACTGTTCTC
ATTGCTGTAC CCAAGAATTT AAAATCTGAC TTCGAAGATT CCTACGAAAC TTTAACTCAG
TTTGTAATCC CAAGATCAGC CGCCGTCATC GCTACCGATC TGGAATATTT ATTATACACG
GTGACCCTCT TCAAAAAATA CCAGCAGGAG TTTACCGCTG CAGCCAGGGA GCACAAATGG
CATCCACGTA CAGACTTTAT ATACTCGGAG GAGACCTTGA ATAACTTGAG AAAGGAGTTC
GACATAACTA GAGCAACAGA GTCCAAGGCT AAGAACGACT TGATCAGATT GGCCAAAACT
GCATATTCCG ATATTTTTGC TTGTTGGTTT CACATCAGGG CAATAAGAGT GTACGTTGAA
TCTGTCTTGA GATACGGGTT ACCCCCACAA TTTGACTACT ATTTGATTAA GTTTGATGGC
GCTAATGCAA AGAATGTGTC AAAAGCCAAA AAGGAATTAA TTGGCAAATT TGGCTTTTTG
GGTGGAGATG GCTTTTCCAA TACCAGCAAT CTTCACGAAT ACGCCTCTTT GGTTGATACT
GAGTATGAGC CTTTCGTCTT GTACGAACTT GAGGTGGTTT AA
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| Protein sequence | MGAIANYLVL SLPQSTNAHD WLTQELIGGK APLYKIKLPD FQSGTLDSLV QESDELSKYD
QQLSASVSKV IDILSTVTES DSTSRVVNSK QATDFIQSFT WNTTKYRLDK PINQLVKILS
NEALTLDNDV RTSYQNYQAA KSNFLAADRK KNGDLSIKSL HEIVRPEQFV LDSEHLATVL
IAVPKNLKSD FEDSYETLTQ FVIPRSAAVI ATDSEYLLYT VTLFKKYQQE FTAAAREHKW
HPRTDFIYSE ETLNNLRKEF DITRATESKA KNDLIRLAKT AYSDIFACWF HIRAIRVYVE
SVLRYGLPPQ FDYYLIKFDG ANAKNVSKAK KELIGKFGFL GGDGFSNTSN LHEYASLVDT
EYEPFVLYEL EVV
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