Gene PICST_57882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_57882 
SymbolDNA43 
ID4838227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp986144 
End bp987994 
Gene Length1851 bp 
Protein Length616 aa 
Translation table12 
GC content39% 
IMG OID640389542 
Productrequired for S-phase initiation or completion (MCM10) 
Protein accessionXP_001383475 
Protein GI150864593 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.657084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAG TAGTAGATCC GCGAGATGAA CATATCGATA CCGATGAGAT CCTCACCGAA 
AGCTCTTCCG ACGAACTCAA TGATCTTGTC AAGCTGTTTG AAGCCAAGTA CGAGGAGCTC
AAGAGAAAGA AGGCATTAAA AAAGCTGCGA AATTCAGCAA ACGAACACGT CTCTCACCAA
CAAAGTAGCA GTATCCTGAA TGATCACGAA CTTATCAAAT CTGCTATGGC ACAGGTTGAA
ACGACTCCAC CACCATCTCC CCAACATAAA ACAGCACCAT CTCTGAAAAA TCTAGTACAG
AGTTCATATA AGCCAACTAT ACCGAAAGTA CCTAAAAGTG ATGTCAAGGC TTCCAGTTTT
ATCAGTAAAT TGTACGATGC CAATTTCGCA AGCAAGGCTC AAAGTCTCCA GAAGATCGAC
TATTCTGAAC GGAAATTTGA ATTTGACGGA GTTCAGGAGA TCAAGTCTGT AAATATTGAA
GCTGATGAAG TAGAGCCTAT ATCGCGTATG CGTCTAAGAA AGCGATATAT CGAACAAAAA
TCGGTAGAGA AGCTCGTATC GGATATCAAT GAATTGAAAT ACCTCCAAGT GGACAAGTTG
CTAGCCAAAG TTCACAAGGG TAATAACTAC GCTGAACCAA TGTATACCAA CTGGTGCTTT
GTAGGGTTCG TTGTCAAGAA GTCAGAACCA AAACAGTCCA AAGACAAGAA CAAATCCAAG
TTCATCAAGC TTTCTGTAGG TAATTTTGTG CGAAGTGTCG ATGTTCTTCT ATTTGGTGAA
GCTTTTAATC AGTATTGGAA AATTAGTCCT GGAAGCTTGG TATTCATTCT TAATCCTTAC
ATAAGTAAGT ACTCTATGGG AGAAGGAAAT GGCATCAAGA CTGGATTCAC CTTGCATGTT
GCAGGTAATA ATACAAATTC AATATTGGAG ATTGGTGCTA TTCGTGATTA TGGCCTATGT
ACTTTTGTGA AAAAGACGGA CTATTCCAGA TGTTCCAATG TCATTGATGT CCTGAAGTCA
TCCTTGTGTG ATTTCCATCT TGATACAAAA TACAGAAAGA GCAGCAGAAT GGAATTGAAT
GGAAGTGTGA TGATGAAGTC TCCACAGAAG AAGAAGGCAG CTGTGTATTT AACCAATGAA
GGTGTTCAAG GAAATGGAGG GTTTATCAGA TTCGCTAATG AGAATACTAC TTTGTATGAA
TCTGGAACAG CAAAAATCGA TTTAAAAAGA TACCACGATC CCCGCATTCT ACAAACTAGT
GAAAAGAAGA GGAAAATGAA CGACGAAAGA GCCAATCAGT TATTGGAAAG AAGGCTTTCT
AAACTTCTGC AAAATTCTGG ATTAAGAGCT CTACATTTAA CAAAAGATCA GCATAAAGAG
GAAAATTCGG CGAAACACTA TGAAATGAAG AATCGTGGAT ATTCGCACAA CATGATCAGC
AAGCTCGGCT TCGATCCTAC TACTACGATG GTGAAATCAC AAGATGCAAG CTACAAGAGC
CCCACAAGGA AAAGACGCGA GCACGAACGA GTCCGAGAAT TGTATGAGCT AAGTAACTCT
AAATCCAAGG AAAGAACCTT GAGAAGTTCA ACAGAAGATC AGAAGTCAAA AATTTCAAAG
TGGCAGGAAA ATATACAAAA CTTGAAGCGT TACAAGGACA GCATTAACAA TTCTCGGGAT
CCATTCTCTG ACTATTCATC CAACACCAAA ACTATTTTGC ATCTCCAGAA ACCAGCAAAG
AACCGCGTAA TTGATGATAC TGACTCTTCC AGCGACAATG ACGATTTAGA TATAGAATTC
GATACAGAAG AGATGAAGCA ATCATATCTA AATAGAGTTA GACAATCTTG A
 
Protein sequence
MNEVVDPRDE HIDTDEILTE SSSDELNDLV KSFEAKYEEL KRKKALKKSR NSANEHVSHQ 
QSSSISNDHE LIKSAMAQVE TTPPPSPQHK TAPSSKNLVQ SSYKPTIPKV PKSDVKASSF
ISKLYDANFA SKAQSLQKID YSERKFEFDG VQEIKSVNIE ADEVEPISRM RLRKRYIEQK
SVEKLVSDIN ELKYLQVDKL LAKVHKGNNY AEPMYTNWCF VGFVVKKSEP KQSKDKNKSK
FIKLSVGNFV RSVDVLLFGE AFNQYWKISP GSLVFILNPY ISKYSMGEGN GIKTGFTLHV
AGNNTNSILE IGAIRDYGLC TFVKKTDYSR CSNVIDVSKS SLCDFHLDTK YRKSSRMELN
GSVMMKSPQK KKAAVYLTNE GVQGNGGFIR FANENTTLYE SGTAKIDLKR YHDPRILQTS
EKKRKMNDER ANQLLERRLS KLSQNSGLRA LHLTKDQHKE ENSAKHYEMK NRGYSHNMIS
KLGFDPTTTM VKSQDASYKS PTRKRREHER VRELYELSNS KSKERTLRSS TEDQKSKISK
WQENIQNLKR YKDSINNSRD PFSDYSSNTK TILHLQKPAK NRVIDDTDSS SDNDDLDIEF
DTEEMKQSYL NRVRQS