Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_57882 |
Symbol | DNA43 |
ID | 4838227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 986144 |
End bp | 987994 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640389542 |
Product | required for S-phase initiation or completion (MCM10) |
Protein accession | XP_001383475 |
Protein GI | 150864593 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.657084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAAG TAGTAGATCC GCGAGATGAA CATATCGATA CCGATGAGAT CCTCACCGAA AGCTCTTCCG ACGAACTCAA TGATCTTGTC AAGCTGTTTG AAGCCAAGTA CGAGGAGCTC AAGAGAAAGA AGGCATTAAA AAAGCTGCGA AATTCAGCAA ACGAACACGT CTCTCACCAA CAAAGTAGCA GTATCCTGAA TGATCACGAA CTTATCAAAT CTGCTATGGC ACAGGTTGAA ACGACTCCAC CACCATCTCC CCAACATAAA ACAGCACCAT CTCTGAAAAA TCTAGTACAG AGTTCATATA AGCCAACTAT ACCGAAAGTA CCTAAAAGTG ATGTCAAGGC TTCCAGTTTT ATCAGTAAAT TGTACGATGC CAATTTCGCA AGCAAGGCTC AAAGTCTCCA GAAGATCGAC TATTCTGAAC GGAAATTTGA ATTTGACGGA GTTCAGGAGA TCAAGTCTGT AAATATTGAA GCTGATGAAG TAGAGCCTAT ATCGCGTATG CGTCTAAGAA AGCGATATAT CGAACAAAAA TCGGTAGAGA AGCTCGTATC GGATATCAAT GAATTGAAAT ACCTCCAAGT GGACAAGTTG CTAGCCAAAG TTCACAAGGG TAATAACTAC GCTGAACCAA TGTATACCAA CTGGTGCTTT GTAGGGTTCG TTGTCAAGAA GTCAGAACCA AAACAGTCCA AAGACAAGAA CAAATCCAAG TTCATCAAGC TTTCTGTAGG TAATTTTGTG CGAAGTGTCG ATGTTCTTCT ATTTGGTGAA GCTTTTAATC AGTATTGGAA AATTAGTCCT GGAAGCTTGG TATTCATTCT TAATCCTTAC ATAAGTAAGT ACTCTATGGG AGAAGGAAAT GGCATCAAGA CTGGATTCAC CTTGCATGTT GCAGGTAATA ATACAAATTC AATATTGGAG ATTGGTGCTA TTCGTGATTA TGGCCTATGT ACTTTTGTGA AAAAGACGGA CTATTCCAGA TGTTCCAATG TCATTGATGT CCTGAAGTCA TCCTTGTGTG ATTTCCATCT TGATACAAAA TACAGAAAGA GCAGCAGAAT GGAATTGAAT GGAAGTGTGA TGATGAAGTC TCCACAGAAG AAGAAGGCAG CTGTGTATTT AACCAATGAA GGTGTTCAAG GAAATGGAGG GTTTATCAGA TTCGCTAATG AGAATACTAC TTTGTATGAA TCTGGAACAG CAAAAATCGA TTTAAAAAGA TACCACGATC CCCGCATTCT ACAAACTAGT GAAAAGAAGA GGAAAATGAA CGACGAAAGA GCCAATCAGT TATTGGAAAG AAGGCTTTCT AAACTTCTGC AAAATTCTGG ATTAAGAGCT CTACATTTAA CAAAAGATCA GCATAAAGAG GAAAATTCGG CGAAACACTA TGAAATGAAG AATCGTGGAT ATTCGCACAA CATGATCAGC AAGCTCGGCT TCGATCCTAC TACTACGATG GTGAAATCAC AAGATGCAAG CTACAAGAGC CCCACAAGGA AAAGACGCGA GCACGAACGA GTCCGAGAAT TGTATGAGCT AAGTAACTCT AAATCCAAGG AAAGAACCTT GAGAAGTTCA ACAGAAGATC AGAAGTCAAA AATTTCAAAG TGGCAGGAAA ATATACAAAA CTTGAAGCGT TACAAGGACA GCATTAACAA TTCTCGGGAT CCATTCTCTG ACTATTCATC CAACACCAAA ACTATTTTGC ATCTCCAGAA ACCAGCAAAG AACCGCGTAA TTGATGATAC TGACTCTTCC AGCGACAATG ACGATTTAGA TATAGAATTC GATACAGAAG AGATGAAGCA ATCATATCTA AATAGAGTTA GACAATCTTG A
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Protein sequence | MNEVVDPRDE HIDTDEILTE SSSDELNDLV KSFEAKYEEL KRKKALKKSR NSANEHVSHQ QSSSISNDHE LIKSAMAQVE TTPPPSPQHK TAPSSKNLVQ SSYKPTIPKV PKSDVKASSF ISKLYDANFA SKAQSLQKID YSERKFEFDG VQEIKSVNIE ADEVEPISRM RLRKRYIEQK SVEKLVSDIN ELKYLQVDKL LAKVHKGNNY AEPMYTNWCF VGFVVKKSEP KQSKDKNKSK FIKLSVGNFV RSVDVLLFGE AFNQYWKISP GSLVFILNPY ISKYSMGEGN GIKTGFTLHV AGNNTNSILE IGAIRDYGLC TFVKKTDYSR CSNVIDVSKS SLCDFHLDTK YRKSSRMELN GSVMMKSPQK KKAAVYLTNE GVQGNGGFIR FANENTTLYE SGTAKIDLKR YHDPRILQTS EKKRKMNDER ANQLLERRLS KLSQNSGLRA LHLTKDQHKE ENSAKHYEMK NRGYSHNMIS KLGFDPTTTM VKSQDASYKS PTRKRREHER VRELYELSNS KSKERTLRSS TEDQKSKISK WQENIQNLKR YKDSINNSRD PFSDYSSNTK TILHLQKPAK NRVIDDTDSS SDNDDLDIEF DTEEMKQSYL NRVRQS
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