Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_57701 |
Symbol | SCO1 |
ID | 4838144 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 1238658 |
End bp | 1239566 |
Gene Length | 909 bp |
Protein Length | 297 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640389459 |
Product | Putative cytochrome C oxidase assembly protein |
Protein accession | XP_001383869 |
Protein GI | 150864872 |
COG category | [R] General function prediction only |
COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0857845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0569846 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTCTC GAATTGCGTT CAGGAGTACC AGAAAGTCGG TTGTGTATTC AGCGAGAAGT TTCGGTATTT CGTTGAGGCG TTTCAACGAA ATTCCAAAGA TTCCCCAGTC TGGTTCAGAT AGTTCAAACC CCGTTCCAGG CTCCAAGAAG AAAAGACCTT TGAGTCGTGT AGCTATAGGC TCTCTGGACT CTGGAAAGAA GTATGCCGAA AACAGCAGTA TCGAGTTTGC GTCCTGGAAG GCCGTTCTTT TGCTCTTAGT ATTGGGAGGT GGAGCAACGT ATTGGTTCAG TAAAGAAAAG GAAAGAATCC GGATTCAGAA GGAGGTTGAC TCCAAGAGAA GTATCGGGAA GCCGTTGATC GGAGGACCAT TCAGTTTGAT TGATACTAAA GGGCAACCTT TTACCCACAA GAATTTGGTC AATGACAACA AGAAGTTTTC TATAATTTAC TTTGGCTTCA CTCACTGCCC AGACGTCTGT CCTGATGAAT TAGACAAATT GGGTGACATG TTGGAAGAGT TGAAGAAGAG CAAAATTGAG ATGCAACCGA TTTTCATCAC ATGCGACCCC GCCAGAGACT CTCCGGAAAT TGTAGAGCAA TACTTGGAAG ACTTTCATCC GGATATCATT GGCTTGACTG GTACTTATGA CGAAGTTAAA AACTGTTGCA AGAAATACAG AGTGTACTTC CTGACTCCGG CAGATATCAA GCCGGGCCAG GACTACTTGG TGGACCACTC TATCTTCTTT TATGTGATGG ACTCTGAGGG GCAATTTGTA GATGTAATTG GCAGAGAAGC CACTGCTGCT GAAGGCGTAG AGAAGATCAA GAAACAGATC GATGCTTTTA TCCCAAAAGA GGAAAGAGAA GCTAGAAAGA AGTCGAAACT TAGTTTTCTC TACAAGTAG
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Protein sequence | MLSRIAFRST RKSVVYSARS FGISLRRFNE IPKIPQSGSD SSNPKKRPLS RVAIGSSDSG KKYAENSSIE FASWKAVLLL LVLGGGATYW FSKEKERIRI QKEVDSKRSI GKPLIGGPFS LIDTKGQPFT HKNLVNDNKK FSIIYFGFTH CPDVCPDELD KLGDMLEELK KSKIEMQPIF ITCDPARDSP EIVEQYLEDF HPDIIGLTGT YDEVKNCCKK YRVYFSTPAD IKPGQDYLVD HSIFFYVMDS EGQFVDVIGR EATAAEGVEK IKKQIDAFIP KEEREARKKS KLSFLYK
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