Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_57623 |
Symbol | |
ID | 4837906 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1664750 |
End bp | 1665925 |
Gene Length | 1176 bp |
Protein Length | 359 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640389221 |
Product | predicted protein |
Protein accession | XP_001383605 |
Protein GI | 150864671 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.229552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00611536 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | CGAGTGCCAC TCATGAAAAG TCCATCTCAC TTGGGTCACT TCACTCTGCG AGTCAATCGG CTCTATAACG AAGACAAGTA CTCAGCAAAT GTACTTCTGC TTCCAGACGA CAAGACAGTT TTCAACTTCA ATATTTTTGA CGGCCATGGC GGTGACCAAT GTCTGACGTA CCTTCTGAAC AACCTTTCGC AGGGAATCGA AGATGCCACA ACTTTGCTCA ACGACGCTGC AAGTCGTGAC AAGTTGATAG AGACTTACTG GAAAAACATC GGAGGATACT GGAAACGGTG GTATAAACAT CGAAACGAAA ATTTCGAAGT AATGAAGGCC TTGTCTACCA CCGAAGACTT GATAACTTTA CCAGATGCCA GCGACGATTT GCATTTACGT CTTCCTTTGG CATTTCTCAA TACAGACTAC AACTTCTTTC TACAAGACGA CAACCAGTCT GGCTCAACAT GTACTACGGC ATTGATTCAA ACAGTACATT CGGAGCCTGG AGCGTTCCAA CCGGTGTATG AGAACTATTT CTTCAATCGT AAAACAATCT CGAAGTTGAC CATAGCACAT GTGGGAGACA CCAGTGCTAT ACTTGTAGAC CGAGACGGTA AGGCTCATAC GCTTACCCAG TCTCACCATC CCTCCAACCC TAGTGAAGCT TCCAGGTTGC GTAAGTACGC TGCCAACTTC TTCATGACCG ATTCGTTTGG GGAAGAACGG TTCATAGCTT TAGCTAATAC CAGAGCTTTT GGGGACATCA ACTTCAAGCA GATGGGCGTA ACGGCAGAAC CAGAAGTGAC TGAATATATA ATTGGCGATG CTCAAACTAT TCAGCAGGAG TTGAGCCCTG AACAGATCAA GACTCACACT GTAGGAGGGA TGGGGGGCGA CGAGAGTTTT CTCATTCTTG TGACAGACGG AGTTACCGAC GTTTTGACTG ATCAAGAAAT CGCCGACATC GTCATGGTTC ATTTCAATTT GAAGGGCCAC GATATAGCAT CACCACAGAT GGGTGCCGAG GAAGTAATCA AATTCGTAGA GTACGTTGGA GGCAGTGACA ACGCGACCTG TTTGATAATA CGGTTGAACG GATGGGGTAA ATGGCCTGTC ATAGACCGAA CAGGTGAACT CAGACAGGAA CGGTTGAACG ACTTCAATCC ACGCGGAAGA AACTAG
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Protein sequence | RVPLMKSPSH LGHFTSRVNR LYNEDKYSAN VLSLPDDKTV FNFNIFDGHG GDQCSTYLSN NLSQGIEDAT TLLNDAASRD KLIETYWKNI GGYWKRWYKH RNENFEVMKA FDDLHLRLPL AFLNTDYNFF LQDDNQSGST CTTALIQTVH SEPGAFQPVY ENYFFNRKTI SKLTIAHVGD TSAILVDRDG KAHTLTQSHH PSNPSEASRL RKYAANFFMT DSFGEERFIA LANTRAFGDI NFKQMGVTAE PEVTEYIIGD AQTIQQDFLI LVTDGVTDVL TDQEIADIVM VHFNLKGHDI ASPQMGAEEV IKFVEYVGGS DNATCLIIRL NGWGKWPVID RTGELRQERL NDFNPRGRN
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