Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_57574 |
Symbol | TFC7 |
ID | 4837998 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1507061 |
End bp | 1508574 |
Gene Length | 1514 bp |
Protein Length | 439 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640389313 |
Product | putative transcription initiation factor |
Protein accession | XP_001383579 |
Protein GI | 126134109 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.625866 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTTA AGCAGATATA TATCGCCAGA CACGGATACC GTGCCAATTG GCTCCCGCTT CCACATCCAC CCAATCCCAC GGGAATAGAT AGTGATCCAC CTTTGGCACC TCATGGAGTC GAACAGGCGA GACAGTTAGC TGCTTACTTG ACTTCGTTGC CGAGTACCGA TAGACCGCAG TTTGTGGTAT CGTCACCTTT CTACCGGTGT GTGGAGACAG CGGAGCCAAT TTCGGAAATG CTTTCGTTGA AGGTAGTTCT AGAACGTGGA GTAGGTGAAT GGTACAGAAA GGGACGTAAG GTGATTCCAC AGCCGGCCGA TTACGACCGG TTGACTCGAT TCTTTCCTAA AGTTTTGGTT GACGAGTCCG AATGGCCCCG TGACACGACC GTAGGTGTGA TTCCAGATCC CACTGGAGAG TCCAATGAAG ATATCTTTGT CAGAGCCAAT GAGTTCTGGA AGCGTTTCTT ACCAGTATTC GAAGAAAAGT ATCCAGATAT TGAGACGATA ATGATCATCA CCCATGCTGC TACCAAGATT GCATTGGGAG CCTCTCTTTT GCGTTTATCG GGTGTTTTGG ACTACATTGA TGACGATAAC AACACGTTTC GTGCTGGAGC TTGTTCTTTG GATAAGTACG TACGTACCAG CGACGGCTGG GACATGAAGA TGAATGGAAA CACCGAGTTC TTAGCGGGTG GAGAGGAGAT GCACTGGGAC TTTCGATCAA CGTATGAAGC GGGCTCCGAC GAAGACATCA AGGCACGGGC AGAGGAAGCT AAGAGGAAGA AAGAACTACA AGAAAAGAAG AGGGAATCGT CATCTATTGC AGAGGCAGCA ATCAGAGACG ACAAACTAAG TGTCAACGAC GATTTTGAGG TACGTAACAA ACCTAGATTC TAATCAGAGT CTACCAGAGT CTTCTAGACA AACTAGAGTC ACCTGGATTC TGTTAGAGTA TATACCAATC ATAATAAATA ATCTTAGTGA GGATGTTACT AACACAATTT TAGGACTTCT ACGTGACGGT CGATATTCCC ATGATCGGAA AGGCCCAGAA CTTTGAGGAT TCCAACAATT TGGAGACCCC AACTTCAAAA GTCAATATTA TCAAGCCGGC AGCACAGTTC CAGATTACAG AGTTGAATAA CGACAACCCC TTGATCAAAT TGTCGAACAA CAGCACTGCT CCTGGAGTAC AGGACACCAA CAACGGCAAT GATGCTATCA ACAGCATCAA TGTGATCGAC GGAAAGATCT ACGAAACCAG CTGGAAAAAG TTGGTTGGAA CAGACTTGAT TTTTGACGAC TACGGTGAAT TGATAGGTAA GGTAACTGAA CACTTGACCG TCAATGAGAA CGTGAAGATT GTACTTAAAG ACAGTTCCAA GACCAAAGAA GACAGCGACG AGGAAGAAGA GGTTGACGCG AATGGCGACC TCAAGACTGC TGGCCAAAGC GCTTTCTTGA AACATGCCAT TAAGCTCGCT AAGAAGAAAG AAGCGCACTC GTAG
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Protein sequence | MAVKQIYIAR HGYRANWLPL PHPPNPTGID SDPPLAPHGV EQARQLAAYL TSLPSTDRPQ FVVSSPFYRC VETAEPISEM LSLKVVLERG VGEWYRKGRK VIPQPADYDR LTRFFPKVLV DESEWPRDTT VGVIPDPTGE SNEDIFVRAN EFWKRFLPVF EEKYPDIETI MIITHAATKI ALGASLLRLS GVLDYIDDDN NTFRAGACSL DKYVRTSDGW DMKMNGNTEF LAGGEEMHWD FRSTYEAGSD EDIKARAEEA KRKKELQEKK RESDFYVTVD IPMIGKAQNF EDSNNLETPT SKVNIIKPAA QFQITELNND NPLIKLSNNS TAPGVQDTNN GNDAINSINV IDGKIYETSW KKLVGTDLIF DDYGELIGKV TEHLTVNENV KIVLKDSSKT KEDSDEEEEV DANGDLKTAG QSAFLKHAIK LAKKKEAHS
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