Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_57391 |
Symbol | |
ID | 4837880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 1015714 |
End bp | 1016634 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640389195 |
Product | predicted protein |
Protein accession | XP_001383823 |
Protein GI | 150864840 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.209701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.500519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ACATCCTATG CCCATGTTGA CCCTCAATAT CTTGGAGACT CTTTGGCTAT AGACGGAACT ATAGAGACGG TGGATTTGAA ATTCGATAAA CACTCTCCAC CACACGAACC AGCCATTTTC AAATCGCCTT TGATATTCTT GCATGGGTTA TTTGGTTCTA GATCAAATAA TAGGACTGTT GCTAAACAGC TAGCTGTGAC TTTAGACAGG GACGTCTACT GTCTTGACTT GCGTAACTTT GGTGAATCGC CTCATATCAG CAGATTGGAT TACCCTTCAT TAGCTGCTGA TGTAGAAAAG TTCATTGTAG ATCAGAAATT TCCCGATTTT GCCAAACCCA TCTTGGTGGG CCATTCTCTT GGAGCCAAAA CTTCTATGGC TGTAGCACTT CGTCGTCCAG ATTTGCCCAG GATGATTGTA GCAGTAGACA ATTCACCCGT GATGGTTTCT GGTAACGACT CTACTGGATC GTTTGGCAAA TACGTCAACC AACTTCGACT TGGTTTGGAA AAATACAAGT ACACAGACAT TAAGGATCTT GACAAGCTCT TGGCCCAAGT CGAATCTAAC CAGACCGTGC GTCAATTTTT GCTTACCAAT GTTAAAAGAG GAAGAAAGGA AGATGTAATC ACCTCTAAGG TGCCTCTTGA TGTTATCGGT AAAGCTATTA CTGCCGGAAA CATTGCCAGC TGGCCCTATG ATCTGAATAT TGTCAGGTGG ACTGGAGGAC CAGCATTGTT TGTCAGAGGT ACCAACTCAC CATATGTTCC GGACGAAGTG ATTCCTGACA TCGGAAAGTA TTTCCCAGAC TTCGAGGTTA GAGACGTGGA AGCTGGCCAT TGGTTGATCA GTGAGAATCC AAAGGCATTC ATGGAGGTGT TGGTTGAATT CATAGAGAGA AAGGAAGACG AAGAGATTTA A
|
Protein sequence | TSYAHVDPQY LGDSLAIDGT IETVDLKFDK HSPPHEPAIF KSPLIFLHGL FGSRSNNRTV AKQLAVTLDR DVYCLDLRNF GESPHISRLD YPSLAADVEK FIVDQKFPDF AKPILVGHSL GAKTSMAVAL RRPDLPRMIV AVDNSPVMVS GNDSTGSFGK YVNQLRLGLE KYKYTDIKDL DKLLAQVESN QTVRQFLLTN VKRGRKEDVI TSKVPLDVIG KAITAGNIAS WPYDSNIVRW TGGPALFVRG TNSPYVPDEV IPDIGKYFPD FEVRDVEAGH WLISENPKAF MEVLVEFIER KEDEEI
|
| |