Gene PICST_57391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_57391 
Symbol 
ID4837880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1015714 
End bp1016634 
Gene Length921 bp 
Protein Length306 aa 
Translation table12 
GC content44% 
IMG OID640389195 
Productpredicted protein 
Protein accessionXP_001383823 
Protein GI150864840 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.209701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.500519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ACATCCTATG CCCATGTTGA CCCTCAATAT CTTGGAGACT CTTTGGCTAT AGACGGAACT 
ATAGAGACGG TGGATTTGAA ATTCGATAAA CACTCTCCAC CACACGAACC AGCCATTTTC
AAATCGCCTT TGATATTCTT GCATGGGTTA TTTGGTTCTA GATCAAATAA TAGGACTGTT
GCTAAACAGC TAGCTGTGAC TTTAGACAGG GACGTCTACT GTCTTGACTT GCGTAACTTT
GGTGAATCGC CTCATATCAG CAGATTGGAT TACCCTTCAT TAGCTGCTGA TGTAGAAAAG
TTCATTGTAG ATCAGAAATT TCCCGATTTT GCCAAACCCA TCTTGGTGGG CCATTCTCTT
GGAGCCAAAA CTTCTATGGC TGTAGCACTT CGTCGTCCAG ATTTGCCCAG GATGATTGTA
GCAGTAGACA ATTCACCCGT GATGGTTTCT GGTAACGACT CTACTGGATC GTTTGGCAAA
TACGTCAACC AACTTCGACT TGGTTTGGAA AAATACAAGT ACACAGACAT TAAGGATCTT
GACAAGCTCT TGGCCCAAGT CGAATCTAAC CAGACCGTGC GTCAATTTTT GCTTACCAAT
GTTAAAAGAG GAAGAAAGGA AGATGTAATC ACCTCTAAGG TGCCTCTTGA TGTTATCGGT
AAAGCTATTA CTGCCGGAAA CATTGCCAGC TGGCCCTATG ATCTGAATAT TGTCAGGTGG
ACTGGAGGAC CAGCATTGTT TGTCAGAGGT ACCAACTCAC CATATGTTCC GGACGAAGTG
ATTCCTGACA TCGGAAAGTA TTTCCCAGAC TTCGAGGTTA GAGACGTGGA AGCTGGCCAT
TGGTTGATCA GTGAGAATCC AAAGGCATTC ATGGAGGTGT TGGTTGAATT CATAGAGAGA
AAGGAAGACG AAGAGATTTA A
 
Protein sequence
TSYAHVDPQY LGDSLAIDGT IETVDLKFDK HSPPHEPAIF KSPLIFLHGL FGSRSNNRTV 
AKQLAVTLDR DVYCLDLRNF GESPHISRLD YPSLAADVEK FIVDQKFPDF AKPILVGHSL
GAKTSMAVAL RRPDLPRMIV AVDNSPVMVS GNDSTGSFGK YVNQLRLGLE KYKYTDIKDL
DKLLAQVESN QTVRQFLLTN VKRGRKEDVI TSKVPLDVIG KAITAGNIAS WPYDSNIVRW
TGGPALFVRG TNSPYVPDEV IPDIGKYFPD FEVRDVEAGH WLISENPKAF MEVLVEFIER
KEDEEI