Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_56574 |
Symbol | |
ID | 4838026 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 963898 |
End bp | 965013 |
Gene Length | 1116 bp |
Protein Length | 363 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640389341 |
Product | predicted protein |
Protein accession | XP_001383815 |
Protein GI | 150864833 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0631] Serine/threonine protein phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.225728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCGC AATCCGCAGA TTCGTCGGAG CCTCCGTCCA TATCCACGTC TACATCTTCT AATAGTAACA GAGTACCGGG AACAGCCCGA GCCCGCAACT CGACTAGTCT GGAACAGTTG TTGGATTCCA GTGATCCGTT CTTTGGACTC TCGTTCAAAG TTGGAGTCGC CGAAAACAAA AATACAACCT TCAGAAACAG AATGGAAGAT GTCCATACCT ATATTGCAAA CTTTGCCGAA CGTGTCGATT GGGGCTACTT TGCCATTTTT GACGGCCATG CCGGCAAAGG AACTGCCAGA TGGTGTGGAA ACAATTTGCA CACCTTGCTA GAAAACGAGA TCGATAGCCA TGACGACAAT GCAGCTCCCT TGCTGGGCCG TTTTGACTTG AAAGACAATC TTTGTAATGC ATTCGTAAAA GCTGACGAGT TGATAGAAAA GGAAGGCGCA GGCTCTTCTG GCAGCACTGC AGCAGTAGCA GTACTTCGTT GGGAAACTGT AGGCGACGAT CTAGCTGAAA AGCCATCAGC CGAAAGTAAA TCTGAAAGCA AATCTGCAAC TAGCACATCG GAAAACTCTA CTTCCAATAC TCTTAATCCG CCAATCAGTT TTGACTTCGT ACCGGCATTT AACCACCGAA GAATGCTCTA TACGTCTAAC GTGGGCGATC TGAGAATAGT CTTGTGTCGT GGAGGTAAAC CTTACAGACT CTCGTACGAC CACAAGGCAA TAGACGTAAA CGAAGTAAAT AGAATTAGAC TGTCGGGAGG TTTGGTAATG AAGAACAGAG TCAACGGTGT TCTTGCTGTT ACAAGATCGC TAGGAGACTC GTATATGAAA GATATCGTCA TTGGACGACC ATTCACGACT GCTACTGAAA TCACACCTGA AGACGAATTC TTGATCATAG CGTGTGACGG TGTTTGGGAT GTGATTTCCG ACCAGAAAGC TTGTAGATTT GTCCAAAACT TGTTCGATAG TGACAGGGAT AATGCTGATC CACAGGCTGC TGCAAAGAAA TTGTGCCAAT TGGCAATCGA CAACTCAACC ACCGATAACG TAACTGTCAT GATAGTAAAG TTTGATAAGA ATGTGTTCAA CCACAGATTA CAATAG
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Protein sequence | MSSQSADSSE PPSISTSTSS NSNRVPGTAR ARNSTSSEQL LDSSDPFFGL SFKVGVAENK NTTFRNRMED VHTYIANFAE RVDWGYFAIF DGHAGKGTAR WCGNNLHTLL ENEIDSHDDN AAPLSGRFDL KDNLCNAFVK ADELIEKEGA GSSGSTAAVA VLRWETPSAE SKSESKSATS TSENSTSNTL NPPISFDFVP AFNHRRMLYT SNVGDSRIVL CRGGKPYRLS YDHKAIDVNE VNRIRSSGGL VMKNRVNGVL AVTRSLGDSY MKDIVIGRPF TTATEITPED EFLIIACDGV WDVISDQKAC RFVQNLFDSD RDNADPQAAA KKLCQLAIDN STTDNVTVMI VKFDKNVFNH RLQ
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