Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_55810 |
Symbol | RRP7 |
ID | 4837400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 556614 |
End bp | 557489 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640388715 |
Product | Ribosomal RNA processing protein 7 |
Protein accession | XP_001382342 |
Protein GI | 150863762 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.748096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.853215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCTCG CTACTGAGAT CAAGGGCTAC AACGTGTTGC CTGTGCTGTT GCCGAAGGCT CAGACCACCC ATTATATATA TTTTAAGAAG CACGAGACTA GATCTACCGA TAACCAGAAG AATAGCAGTG GAAGATCCAT CTTCTTATGC AACCTACCCA TTGGAACAAC CACGTCCACA CTCAAGAAAT TCTTTCAGGA AGTCGCTATC GGTGCCACTA TCGAAACTTT TGTTGCAAGT TTGTTAAATG ACTGCCCTGA GGACGTGTGG ATCAATTTGA CGAAACTCAC ATCTGATCTT GAGTTCAATC CCGACTTGCA ATCGGCCAGA AACACCAACG ATGAGGCTGC CAGATTGCCC AAAAACTGTG GTGTAGTAAC TTTTGTAGAT AAACTGGCCT TCCAACTTGC TTACACTGCC ATCAGGAAGT TGTCTGCAGC CAGAACTGTA TCTTCATGGC CGTTTTCAAC CTACGATTCC AAGTACTTTT TAAACCACTA CAAGTCACAG ATTCTTGATG CCGAAGCTTT GTCTGATGCG GTGTCACAGG CCCTTGTAGA CTTTGATAGA GCCGAACAGG AGTCTCGTGA TAACTTGCAG CAGCAAACAC AGTTGGTAGA CGAAGACGGA TTTACTTTGG TTGTAGGCTC TCATAGAAAA ACAAAGGCTG GGATCATGGG CAAACAGAAG CTTGCCGCCA CCGTTGAGTT GGACAAGGCC AATACCAAGT TGAAAAAGAA GGAAAAGGAA GATTTCTACC GTTTCCAGTT AAGACAGAGA AAAAAGGACG AAATGAACGA GTTACTCCAG AAGTTCAAGT TGGACCAGGA AAAGGTCCGT TTGATGAGAG AAAAGAAGAG ATTCAGACCC TATTAG
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Protein sequence | MVLATEIKGY NVLPVSLPKA QTTHYIYFKK HETRSTDNQK NSSGRSIFLC NLPIGTTTST LKKFFQEVAI GATIETFVAS LLNDCPEDVW INLTKLTSDL EFNPDLQSAR NTNDEAARLP KNCGVVTFVD KSAFQLAYTA IRKLSAARTV SSWPFSTYDS KYFLNHYKSQ ILDAEALSDA VSQALVDFDR AEQESRDNLQ QQTQLVDEDG FTLVVGSHRK TKAGIMGKQK LAATVELDKA NTKLKKKEKE DFYRFQLRQR KKDEMNELLQ KFKLDQEKVR LMREKKRFRP Y
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