Gene PICST_55369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_55369 
SymbolYAH1 
ID4836857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp948454 
End bp948888 
Gene Length435 bp 
Protein Length144 aa 
Translation table12 
GC content44% 
IMG OID640388172 
Productmitochondrial matrix iron-sulfur protein 
Protein accessionXP_001382952 
Protein GI126132854 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.5587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGAA GCCCTTTTTC TGGTTTTAGA AACTTCCACC AATCTGCTTC ATTGCTCCAT 
GGCCATATTC ACAAACCCAA TCCTGGCGAA GAGCTCCATA TAACGTTCAT TACTAAAGAC
GGAAGCCAGT TCACTTACGA AGTTGCTGAG GGCGACAACA TCTTGGACAT TGCCCAGGCA
TATAACTTGG ACATGGAAGG CGCTTGTGGT GGATCTTGTG CCTGTTCCAC ATGCCACATA
ATCGTTGACC CAGAATTCTA CGATGAGATC CCAGAGCCTG ATGATGACGA AAACGATATG
TTGGATTTGG CTTTTGGATT GACCGAAACT TCGAGATTGG GTTGTCAAGT CAAAATGACG
AAGGAATTGG ATGGAATAAG AGTAGCCTTG CCTGCCATGA CTAGAAATTT ACAATCCAGA
GACTTCAACA ACTGA
 
Protein sequence
MFRSPFSGFR NFHQSASLLH GHIHKPNPGE ELHITFITKD GSQFTYEVAE GDNILDIAQA 
YNLDMEGACG GSCACSTCHI IVDPEFYDEI PEPDDDENDM LDLAFGLTET SRLGCQVKMT
KELDGIRVAL PAMTRNLQSR DFNN