| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_55332 |
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| Symbol | |
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| ID | 4837068 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 683678 |
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| End bp | 685075 |
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| Gene Length | 1398 bp |
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| Protein Length | 430 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388383 |
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| Product | predicted protein |
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| Protein accession | XP_001382371 |
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| Protein GI | 150863777 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG5623] Pre-mRNA cleavage and polyadenylation factor IA/II complex, subunit CLP1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.692936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTCGCCATAC CTGAGGGTTC AGAATGGCGA ATTGAAGTAC CGCATAAGAC AATTCTCAAG
TTCAAAGTAA CTGAAGGAGT AGCAGAGATT TTTGGCACGG AATTACCAAT AAATGTTGAG
CTACAGATAT CTGGAACGAA GACAATGGTG TATGCTCCCA TAAGTGGGGG TGCGAAGTTA
GTTTACGAAA CTTTTAAAAA CAAAACGGTG ATGTCGAATG AAAGTGAAGA AATTGTAGAG
TATCTCTCTA ATGACTCTGT AATGGCCAAC TATATAAATT TGCACTTAGT TGTCGAAGCC
ATGCGACAGC AGGTTTCAGA TAACAACATA TTGAATCCGA CAGAATTACA GCTGGGCCCG
CGGGTGTTAA TCGTAGGGAA CGGCAATTCA GGCAAGACGT CATTGGCGAA GTTGTTGAGT
GCATATGCTA TAAAACTGGA CAGTACGCCG GTGCTAGTAA ACTTGAATCC TCGGGATGGC
GTTTTCTCGT TGCCCGGATC ATTGACGGCA ACGCCTATCA GCGATAGTCT AGATGTGGAA
CTGGCTAACG GTTGGGGGTT CACGACAACG TCTGGATCAT TATTCCACAA TCCCAAACAG
CCCATAGTAA AGAACTACGG CTTTGTAGAT GTGAATGAAA ACTTAGACTT GTACAAGTAC
CAGGTTTCGA AGCTTGGAGT CACCGTACTC TCGCGTCTTG AAGAAGATAT AGCCTGTAGA
AACGGAGGCG TTATCATCGA CACACCTGCA TTGGGCATCA AAGACTTCAC GGTGATTGAA
AATATCGTTT CAGACTTCGA GGTAAACCTC ATTGTTGTTT TGGGAAATGA ACGGCTCATG
ATCGACTTAA AGAAACGCTT CAAACATAAG TCAGCTTTGC AGATTGTAAA AGTGCCCAAG
AGCGAAGGTT TGGTAGAAGT AGATGAAGCG TTCATACGTA GAACCCAAGA AGAGTCCATC
AAGGAGTATT TTAACGGAAA TTACAAAACA AGGTTGTCGC CCTTCAAAAC TGACATCGAT
GTTAACGATC ATACTATCTA CAAATGCGTA CTTTCTCTGG ATGTTAACTC AGCTCTTTCT
TTTCTACCAG CTGGTGATTC ATACACTGTT GCTGAAGACG AAGGCGACGA CAAGGATAAG
GCAGAAGATG AGTTGAACAA ATACTATACC CTCTTGTCAG AACCCAGTTC GTCTAACTTA
GACAACTCCA TTCTTGCCAT CACTCAGTTG CCTCTGACGC ACAAGCTGGG CAGAGAGTTG
TTGAACACAA GCATTCTTGG CTATGTCCAT GTATCCAAGT TTGACGATGC CAAAGGTAAA
ATCAAGGTAT TGTTACCTTT TCCAGGAGGA TTTCCCAGAA ACATGTTGAT TTCTACGAAC
ATTGGATTCA ATGAGTAG
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| Protein sequence | VAIPEGSEWR IEVPHKTILK FKVTEGVAEI FGTELPINVE LQISGTKTMV YAPIIYETFK
NKTVMSNESE EIVEYLSNDS VMANYINLHL VVEAMRQQVS DNNILNPTEL QSGPRVLIVG
NGNSGKTSLA KLLSAYAIKS DSTPVLVNLN PRDGVFSLPG SLTATPISDS LDVESANGWG
FTTTSGSLFH NPKQPIVKNY GFVDVNENLD LYKYQVSKLG VTVLSRLEED IACRNGGVII
DTPALGIKDF TVIENIVSDF EVNLIVVLGN ERLMIDLKKR FKHKSALQIV KVPKSEGLVE
VDEAFIRRTQ EESIKEYFNG NYKTRLSPFK TDIDVNDHTI YKCVLSSDVN SALSFLPAEP
SSSNLDNSIL AITQLPSTHK SGRELLNTSI LGYVHVSKFD DAKGKIKVLL PFPGGFPRNM
LISTNIGFNE
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