Gene PICST_54893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_54893 
SymbolFAR11 
ID4837000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1493247 
End bp1496045 
Gene Length2799 bp 
Protein Length932 aa 
Translation table12 
GC content38% 
IMG OID640388315 
ProductFactor arrest protein 11 
Protein accessionXP_001383058 
Protein GI150864300 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.476468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGATG AATTGATTCT GATAGACAAG CTCGAAGATC AGATCATCGA TCATCCGGAT 
GCATCTACGA AAAAGGAGTT GCACGACTCT TTGGACGAGA CGTTCCAGAA AAAGTTGAAT
GCCCGTGCCG AACAGATCAG AACAAACCAG ACCTTTGACA AGAAGAGACG TGACGGAGGG
CCGATCCAAC TGGGATCCTA TCAAGAAACA TCTGGTTCAG TCAATTTTCA ATTTTTGGTG
ACGAAATCAC ATCTCAAATA TGAATATAAA GACTACGGTC TGATTCAACA AGAGCTCAGC
GAATGGTTCA CATATAATGA TCTCCTGACC TTTGGAGGAG TCGATGCGCT TCATCAGTTG
TTCGAGAGTA ATAGGAACCA AAAGGAAACT GACAATAATG TTTTGGATGA AACAGAATTG
ATCAAGAAAT GCGTTTCTAC ACTCAAAAAG TATAATATAC AAGAGGGTAA CCCATCATTG
ACTACAGCAT TGAAGATATT GCTTTATTTC TCGTTTGGAC AGTATGGTGA TAAAGTGGAT
TCGGAAGAGC AGCTTCATCT GATTGTAGAA AACAACAAAT ATCTTGTCTC TATTGAAGCT
TATTTACCAT TGACTGAACT CATAAATAAA CTCATTCAAC ATCAGATAGA TGTGGACTCC
AAGAGAGCCA ACACTGGATT GACCGCTCCA GTTGAAAGCG ACTACTTTAT TGCCTTAACT
TTATTATACT TTATGATCTG TACGATGTTA TCGTTACCAG TAGAGACTCC TGCTGTACTT
CTGTTCAAAA GTACTCTCGG ACGCCAGGAT TTGCTTACGT CTATCACAAA GTTCATTGAA
AATTGGAAGT GGAAGCCAGC CAACTCCTAC AGAATTAGAT ATTTGATCAT GATGTCATGG
AAGCTCATCC TTTTTGAGAT GGGTGACACG AGCCAGTTGA AAAAATGTGA TGATTTCTTG
GTCGAGTATC ACGACATTAA GAACAAAAAA GGGAAGGATT TGCCATCTAC TAAATTGACC
TGTTCTCCTT TGGATTACTT TGCTTTCAGA GAAGATTTGT TGGATAAGTA TCCTTTATAC
AATGACCCCA ATCTGAAAGT CTTTGATTTC AGCGAGTTCC ATAAGCATTT TGATAATGAT
GACGAAGACA GTGCTAGCAT TTCAAGCAAA TTAAGTGGCC AGCTGTCCTT GGATGAAAGA
TATAAGTATT TTATGGCTAT CAATTCGTTC TCGAATTCAC TTTCTAACTT GGTAGAGAGC
CCAAAGACAA ACAGATCTCA CACAGTGTTT AGTCAATTGC CAGCTCAAAC TGTACACATC
GCTACACCCG TACCTTCGCC CAAATTGATG ACGTCTGACT ACATGTCAGG AGGGGAAAAG
ATTAGACGTT CATATCAAGT CAACCAAGCA ATGCCATTTA TATATCCCAA CGCGTCTGAT
ATGACCCCGT GTACATCTTC AGATGGTGTA GAAGTCCCTT ATGCTATTAA AGAAGCAAAT
GAAATCTTGA AAGATTCGGT ATATGAAAGC TACTCCATCA AGAGACTCTG GGATGAGAGA
CAACGTTTCA TGAAACAAGA GAGAGGTTAC GTCAACGAAT ATGGCGACGA AGCACCAGAT
GAATTACAAG AAGAAAACTA TGACAATATC GATTATGGAT TTAAGTCTAG GTCTAGATCA
GAAATAAGGT CCATCAGAAG AGTTGAAGAC TTCTATTCCA AAAATATTGT CAGGCTCCAC
ACTTTCATTC AGGTTTTGGT CGAAACTATC AAGAGCAACA GAATGGACTA CAACTTAAAC
TTTGCCGAAT GGGAACTTAA CCCAGAAACC TCGTATTTCA ATAAGTCTAA TACTACCACT
TCTGAGAATG GCAAAAATGC CAAAACGAGA ATCGAATACG TGTTAATGCT GCAGTTGGAA
GTGATCAATA TTAAGGAAAT TACATTGAAA GCCAGCACCA GTATTATTAT CTTGTTGTTG
AAATGGTTCA AGATCAGTCA CGTCTTGAAG TATTACTATC TATCATCAAT TTTATTCGAT
CAGCAATTCT TCACAATTAC CCTTGACTAC TTAGGTAACG GGTTCAACAA TTCTAATTTA
CAAAGTATGG CAACAGCCGA TAAAATGGAA GATTTGACCG ACTACGAAAT CCTAGTCAAT
CAGAACAAAC TTATGAATCC ACAAATCAAA ATACCCAAAT TTGAGTTCTT CAATAATTGC
ATCAAAAGCT TCCCCACCGA ATACCATTAT GAGTTGATCA ACAGGGACAT GACCATGAAC
CTTCCTGAAA CTGTAGATGA AAACAGCGTC AACCATATTT ATATCACGAA ATGTAACGAA
AACTTTGCAT TCATTCTCTC CAACATTCTC AAAATCATAA ACAAGATCCT AATCAAAAAT
GTGACCCACA GAATCTTCAC TTTCAACGAA CTTAAACCCT CCGAGCTATA CAAGATGATC
CTTATTAACT ACGATAATGA GTCATTGAGT AAGCCAATAT TGAAAACACT AAAAAAGTTG
ATTCCATACC AGGGCCGGAA GTGGAAGTCC ATCAATATGG ACTTGATCAG TCAAATATAT
CTCAACCTCA AGCTTTCGGT CAAGGACAAC TGGTTGAGTG GAAAGGATCT TGAAAGCGAT
TTTAATAATT CATATGACCA AGAAATTGCT CTTCGGGGTC TCTTGCAATT CTACAACATC
CGAAAATACC CAAAGCAGAT GAACTTAATC GGGTACCAGA TCAATAAGGA TTTAGATATT
CCAGTGTTCA ATCTCAATGA AGACGAAGAG ATATTCTAA
 
Protein sequence
MQDELISIDK LEDQIIDHPD ASTKKELHDS LDETFQKKLN ARAEQIRTNQ TFDKKRRDGG 
PIQSGSYQET SGSVNFQFLV TKSHLKYEYK DYGSIQQELS EWFTYNDLST FGGVDALHQL
FESNRNQKET DNNVLDETEL IKKCVSTLKK YNIQEGNPSL TTALKILLYF SFGQYGDKVD
SEEQLHSIVE NNKYLVSIEA YLPLTELINK LIQHQIDVDS KRANTGLTAP VESDYFIALT
LLYFMICTML SLPVETPAVL SFKSTLGRQD LLTSITKFIE NWKWKPANSY RIRYLIMMSW
KLILFEMGDT SQLKKCDDFL VEYHDIKNKK GKDLPSTKLT CSPLDYFAFR EDLLDKYPLY
NDPNSKVFDF SEFHKHFDND DEDSASISSK LSGQSSLDER YKYFMAINSF SNSLSNLVES
PKTNRSHTVF SQLPAQTVHI ATPVPSPKLM TSDYMSGGEK IRRSYQVNQA MPFIYPNASD
MTPCTSSDGV EVPYAIKEAN EILKDSVYES YSIKRLWDER QRFMKQERGY VNEYGDEAPD
ELQEENYDNI DYGFKSRSRS EIRSIRRVED FYSKNIVRLH TFIQVLVETI KSNRMDYNLN
FAEWELNPET SYFNKSNTTT SENGKNAKTR IEYVLMSQLE VINIKEITLK ASTSIIILLL
KWFKISHVLK YYYLSSILFD QQFFTITLDY LGNGFNNSNL QSMATADKME DLTDYEILVN
QNKLMNPQIK IPKFEFFNNC IKSFPTEYHY ELINRDMTMN LPETVDENSV NHIYITKCNE
NFAFILSNIL KIINKILIKN VTHRIFTFNE LKPSELYKMI LINYDNESLS KPILKTLKKL
IPYQGRKWKS INMDLISQIY LNLKLSVKDN WLSGKDLESD FNNSYDQEIA LRGLLQFYNI
RKYPKQMNLI GYQINKDLDI PVFNLNEDEE IF