Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_54201 |
Symbol | SMP3 |
ID | 4836848 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 504742 |
End bp | 506343 |
Gene Length | 1602 bp |
Protein Length | 507 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640388163 |
Product | alpha 1,2 mannosyltransferase |
Protein accession | XP_001382332 |
Protein GI | 150863755 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000103091 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCGG TATTCAGTTG GAGAAGTTAC TATCTTGTTC TTCTTGCTCT CAGATTTTAC TTTGCGCTCG CGAACTCGTA CATCCATCCA GATGAGCACT TCCAGAGCAT GGAGGTGATC TGCAATAAGA TCCTCCACTA CTCTGGTAAC CTCCCGTGGG AATTCACGTC GGGCAACCAG GCAAGAAGTA TGGGCCCATT GTACTTGATG TATGGACCAA TTCTTTATTC TATCAAGTGG CTCGGACTGC AACTTACACC TCTCCAGATC TGGTATGTGG TGCGATTGCA AAATGTCTTC TTAACGTGGA TCATCACAGA CATGTGCATT TACCGTCTAC TACCAACTAA GCCCGAGAGA ATAAAAGGAG TCTACTTCAC CTTAAGCTCG TATGTCACTT TGGTATACCA ATCACATCTA TTTTCCAATA GTATAGAAAC GTGTCTTTTG CTTCTAGCCA TTGTGATCAT TAATAATTTG AGATTTGCAC AGGAGATCAA AACCAAAAGT GATGAGAATA GTCCCAATCT GAGCTTGTTA TGGCTTGGGG TTATTGTTTC CATAGGAGTC TTCAATCGCG TCACGTTCCC TGCCTTTCTC GTTTTACCAT TTTGGTACGT GCTCACATAC GTTTGGTGCC ATAAGGTAAG TGGAATCTAT TTGGCTATTG GAGCCATTGT GCCCACGTAT TTGTTCATCT TGATCGATAG TTTGAGCTTT GGAAAGTCAT GGGCTCAAAT CATAGCTTCC CCGTTCGACT TGGACAGTTA CGTTATCACA CCATTGAACA ATCTAATATA CAACACTAAC TACCTGAACT TGGCTCAACA TGGCATTCAT CCATATTATA CCCACATTCT TGTCAACTTG CCCCAACTTT TGGGTCCAGG CATCTTGTTC TTATTTAAAA CGTCTTACTG GAAGACGACA CCGTTCTTGA GCATCGTGAG TGGCATTGTA GTATTATCGC TTGTTCCTCA CCAAGAGCTC AGATTTTTGA TTCCTATTGT ACCTTTAGCC TGTTGCTGTT TTGACCTTTA CTCGTACTCT ACAAATTACG AAGGAAAGCT TAGGCAGTCA CTTTTGGGCT CCATATCGCT CAAGTCGTGG TACATCTTCA ACATTGCCAT GGCTATGCTT ATGGGAGTAT TCCATCAGGG TGGTGTAGTT CCGGCCTTGG ATGAACTCCA CTTGCAATTG TTCCAAAATA CCTCGACTAG TCTGGTACAA GTGTGGTGGA GAACGTATTC CCCACCAACA TGGATGTTAG GAGATACAAA TAGCACAGTT CAGACGATTA CGCTCAACGA CGAGAACTTC CACTTGGGTT ATGAGTTGGA TACCTCTAAA CAGAACTACG TCTTTGATAT GATGGGGACA AATTATGACA AAGTGTACCA GTTTCTTGTA GGTTTGAAAA AGCAGAGGGA TAGACCTGTG TACTTTATTA CACCTACAGC TTCGTTCAAT GTCAACTTTA AAAATCAAGC TCTCAAATTC AATCTGACAT GGAACTATAC TTTTCATTTG GATATGGACC ATCTTGATTT TTCTGATTAT GAGACTTTGG TCCCAGGCTT GTCGATTTAC GAAATGTTAT GA
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Protein sequence | MSSVFSWRSY YLVLLALRFY FALANSYIHP DEHFQSMEVI CNKILHYSGN LPWEFTSGNQ ARSMGPLYLM YGPILYSIKW LGSQLTPLQI WYVVRLQNVF LTWIITDMCI YRLLPTKPER IKGVYFTLSS YVTLVYQSHL FSNSIETCLL LLAIVIINNL RFAQEIKTKS DENSPNSSLL WLGVIVSIGV FNRVTFPAFL VLPFWYVLTY VWCHKVSGIY LAIGAIVPTY LFILIDSLSF GKSWAQIIAS PFDLDSYVIT PLNNLIYNTN YSNLAQHGIH PYYTHILVNL PQLLGPGILF LFKTSYWKTT PFLSIVSGIV VLSLVPHQEL RFLIPIVPLA CCCFDLYSQS LLGSISLKSW YIFNIAMAML MGVFHQGGVV PALDELHLQF SVQVWWRTYS PPTWMLGDTN STNFHLGYEL DTSKQNYVFD MMGTNYDKVY QFLVGLKKQR DRPVYFITPT ASFNVNFKNQ ALKFNSTWNY TFHLDMDHLD FSDYETLVPG LSIYEML
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