| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_54188 |
|---|
| Symbol | |
|---|
| ID | 4836765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 1525801 |
|---|
| End bp | 1526838 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640388080 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001383066 |
|---|
| Protein GI | 126133082 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.298073 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ACAGCAGAAG CCATTATCTA CATCTTGGGG TGGTACTTCT TCTCGTTGTC GATCTCTATC
TACAACAAGT GGATGTTTGG CAAAGACGGA CTCGATTTCA AGTTCCCCAT TCTCATCACT
GCCTTCCACC AGTTCTGTCT TATGATCATG AGCTGCATCG TACTATACAG TAGACCCAAG
TTACGACCCA CAGTCAACGA AGTTGCTGAC CCAACAGACA ACTCCTTCTC AAAATTCTTA
AGGACGTTCA GAATGGACTC CATTGCATAT TTGAAACAGA TCTTTCCATG TTCGTTAGCA
TCTGCTGGGG ACATAGGTCT CTCCAACGTT TCTTTCAAAT TCATCTCTTT AAGTTTGTAC
ACTATGTTGA AAACTTCGTC GTTGATGTTT GTTCTCATGT TCGGACTTCT TTTCAGGCTT
GAAAAGTTCA ATTGGCGTTT AGTCAGTATA GTCTTAGTCA TGACAGGTTC CGTAATTATG
ATGGTAAAAA AACCAGATGA TTACGAACCA GACGAAGAAG ATACCCACAA TAGCATTGGA
ATCATATTAG TTATAGGAGC TTCGGTTATG TCGGGCCTTA GATGGTCTTT TACCCAGTTG
TTGTTGAAAA GGAATCCATA CACAAGCAAC TCCATATCTA CCATATTCTA CATTTCTCCT
TCAATGTGTC TCATCTTATT TTTCTTAGGT TTAATTTTTG AAGGATGGAC AAACTTCACT
GATTCTCATG TGTGGGAAGT ACGGGGTCTT GTTGGAACGT TATCGTTAAT GATTATTCCC
GGCTTCTTAG CATTTATGAT GACATTGTGT GAATTTAAGT TGTTAACTGT TGCACAGGTG
ATCACGCTAT CAGTTGCTGG TATCTTCAAA GAATTGCTCA CGATCTTGTT GAGTTCCTTG
ATCTTCGGCG ACAAACTTAG TATTATCAAT GGTCTTGGAT TGGTTATTAC ATTTGCTGAT
ATAATCTGGT ACAACTACTA TAGGTACAAT GAGAGCATTG ACAACGATGG TTATGTGAGT
CTCAAGGCCA GAAATGAC
|
|---|
| Protein sequence | TAEAIIYILG WYFFSLSISI YNKWMFGKDG LDFKFPILIT AFHQFCLMIM SCIVLYSRPK
LRPTVNEVAD PTDNSFSKFL RTFRMDSIAY LKQIFPCSLA SAGDIGLSNV SFKFISLSLY
TMLKTSSLMF VLMFGLLFRL EKFNWRLVSI VLVMTGSVIM MVKKPDDYEP DEEDTHNSIG
IILVIGASVM SGLRWSFTQL LLKRNPYTSN SISTIFYISP SMCLILFFLG LIFEGWTNFT
DSHVWEVRGL VGTLSLMIIP GFLAFMMTLC EFKLLTVAQV ITLSVAGIFK ELLTILLSSL
IFGDKLSIIN GLGLVITFAD IIWYNYYRYN ESIDNDGYVS LKARND
|
|---|
| |