Gene PICST_53138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_53138 
Symbol 
ID4851753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2747173 
End bp2747553 
Gene Length381 bp 
Protein Length126 aa 
Translation table 
GC content48% 
IMG OID640393461 
Productpredicted protein 
Protein accessionXP_001386856 
Protein GI126275495 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1358] Ribosomal protein HS6-type (S12/L30/L7a) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCC CAAACCCAAA GGCTTTCCCA TTGGCTGATT CTGGCTTGTC CCAGCAAATT 
CTCGATGTCG TTCAACAAGC CCAGAACTTG AGACAATTGA AGAAGGGTGC CAACGAAGCC
ACCAAGACCT TGAACAGAGG TATTTCTGAG TTCATCATCA TGGCTGCTGA CACCGAGCCT
ATTGAAATCT TGTTGCACTT GCCATTGTTG TGTGAAGACA AGAACGTTCC ATACGTCTTT
GTTCCATCCA AGGCTGCCTT GGGTAGAGCC TGTGGAGTCT CCAGACCAGT CATCGCTGCC
TCGGTCACCT CCAACGACGC TTCTTCCATC AAGAACCAGA TCTACTCTAT CAAGGACAAG
ATCGAAACCT TGTTGATCTA A
 
Protein sequence
MSAPNPKAFP LADSGLSQQI LDVVQQAQNL RQLKKGANEA TKTLNRGISE FIIMAADTEP 
IEILLHLPLL CEDKNVPYVF VPSKAALGRA CGVSRPVIAA SVTSNDASSI KNQIYSIKDK
IETLLI