Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_53138 |
Symbol | |
ID | 4851753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 2747173 |
End bp | 2747553 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | |
GC content | 48% |
IMG OID | 640393461 |
Product | predicted protein |
Protein accession | XP_001386856 |
Protein GI | 126275495 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1358] Ribosomal protein HS6-type (S12/L30/L7a) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGCCC CAAACCCAAA GGCTTTCCCA TTGGCTGATT CTGGCTTGTC CCAGCAAATT CTCGATGTCG TTCAACAAGC CCAGAACTTG AGACAATTGA AGAAGGGTGC CAACGAAGCC ACCAAGACCT TGAACAGAGG TATTTCTGAG TTCATCATCA TGGCTGCTGA CACCGAGCCT ATTGAAATCT TGTTGCACTT GCCATTGTTG TGTGAAGACA AGAACGTTCC ATACGTCTTT GTTCCATCCA AGGCTGCCTT GGGTAGAGCC TGTGGAGTCT CCAGACCAGT CATCGCTGCC TCGGTCACCT CCAACGACGC TTCTTCCATC AAGAACCAGA TCTACTCTAT CAAGGACAAG ATCGAAACCT TGTTGATCTA A
|
Protein sequence | MSAPNPKAFP LADSGLSQQI LDVVQQAQNL RQLKKGANEA TKTLNRGISE FIIMAADTEP IEILLHLPLL CEDKNVPYVF VPSKAALGRA CGVSRPVIAA SVTSNDASSI KNQIYSIKDK IETLLI
|
| |