Gene PICST_53027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_53027 
SymbolDAK1.2 
ID4852046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp3497150 
End bp3498937 
Gene Length1788 bp 
Protein Length595 aa 
Translation table 
GC content39% 
IMG OID640393754 
ProductDihydroxyacetone kinase 1 (Glycerone kinase 1) (DHA kinase 1) 
Protein accessionXP_001387241 
Protein GI126276421 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2376] Dihydroxyacetone kinase 
TIGRFAM ID[TIGR02361] dihydroxyacetone kinase, ATP-dependent 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAC ACTTTTTACC CGCCAATTCT TCTCAATTGG TTCCCAACTG CCTCAAAGGT 
TTACTCACCG AGAATGACAA CTTGTCCCTT TTAGAAAAAG AGAAAGTGAT CTTCAACAAC
CAGTTCGATA GCAAAAAGGT CTCGTTGATT GGTGGAGGAG GTTCAGGACA TGAACCAGGA
TGGTCTGGAT TAGTTGGCAC TGGTATGTTA ACAAGTGCAG CTCAAGGTGA AGTGTTCGCT
TGCTCCAATT GCAACAACAT TTTGGCTGCC GAGAAGGTGA CTCATTCCGA TGCCGGTGTC
ATTTTTATTA TCACCAATTA TACTGGCGAT AACTTGTACT TTGGAATGGC AACCCAAGAA
TTAATTTCCA GATTTGGAGA CGATAAGGTC AAACTTTTGA AAGTTGCGGA CGATGTTGCT
GTCGGAAGAC AAAAGGGTGC TAAAGTTGGC CGCCGTACAT TAGCCGGTTA CACCTTGGTG
TCTAAAATTA TGGGTGCTGC TAGCAATCTT GGTTACTCGA TTGACTTTAT TTATCAGATT
GGATCTTGTG TTGCCAAAAA CATTGCTTCA ATAAATGCTG GTTTGGATCA TGTTCATATA
CCTGGGCATT CGACTGAAGG GGACTACGGT AAGCTCAATG CAAACCAAAT TGAAATAGGT
CTAGGAATTC ACAACGAACC AGGGGTGCTC AAATTGAATT TTATCCCAAC AAACGAAGAG
TTGGTATCTG TATTATTGAA ATATATTCTT GATGAAACCG ATGTGGATCG GGGCTTCTTC
AACTATGATG AAGACGACGA AATAGTTCTT CTATTTAATA ATCTTGGAGG AATTCCAATT
ATTGAGGAAA AAGGGTTGTT ATTCACAGTT GTTGAGGCTC TTGAGACAAA TTACAATATT
TCCCCATCTA GGGTTTACTC AGGACCTTTT CTTACTTCCT TAAACGCACC AATCTTTACT
ATATCCTTAT TCAACGTTAC TAAGGCTGCT GGAAAGGAAT TCGGTACCAC ACTTTTATTT
GATTTACTTG ATCACCCAAC AGTTGCAAGT GGTTGGGCAC GCTCACATTA TAGTAATCCT
GGAAGAAGCA CCTACAAGAG TAGAATTATT AAGGATTTTA AAGGATACGA AGAAATGGAA
ACTTCGTCCC ACGTTGACGT TAGAATTGAT CAAGCTTTGC TTAAAAGAAT TATTAAGACT
TCTGCTAAAA ATGTAATCGA CAGGGAGCCT GACATCACTG TTTGGGATAC TAAAATGGGT
GATGGAGATT GTGGCAAGAC TTTGGAGACA GGAGCAAATG CTGTGATTCA AGCTTTGGAA
AGAGGTGCTT TTGAAGATGG GTCTGTTATA AATGCAATAC AAGTAGTATT GAAAATTATC
AAAGAGGACA TGGGAGGTAC ATTAGGTGCC ATTTTGTTCA TCTTTGTAAG AGGATTCCTT
AATAATTTTG AGAAGTTGAT CGAAATCACA GATTCAGTTA ACACGTTTAC ATATTCCGAA
GCTTTGAAAA AAGCTACTGA AGTATTGAAC AAATTTTCCA CCGCCAGAAT AGGCGACAGA
ACTATAATGG ACGTTTTAGT TCCTTTTGTT GAGGAATTTT ACAAAACCCA TGATATTGAG
TTGGCCATTT CAGTGGCCCA AGAGGCCGCT GAAAACACCA GAAAACTAAC TCCAAAGTTA
GGAAGAGCCA CATACGTTGG AATTGATGAT CAAACTGAAT TTCCTCCAGA CCCAGGTGCT
TACGGCGTCT ATGAAATTAT TAGAGCTTTT CAATTAATTA ATCATTGA
 
Protein sequence
MNKHFLPANS SQLVPNCLKG LLTENDNLSL LEKEKVIFNN QFDSKKVSLI GGGGSGHEPG 
WSGLVGTGML TSAAQGEVFA CSNCNNILAA EKVTHSDAGV IFIITNYTGD NLYFGMATQE
LISRFGDDKV KLLKVADDVA VGRQKGAKVG RRTLAGYTLV SKIMGAASNL GYSIDFIYQI
GSCVAKNIAS INAGLDHVHI PGHSTEGDYG KLNANQIEIG LGIHNEPGVL KLNFIPTNEE
LVSVLLKYIL DETDVDRGFF NYDEDDEIVL LFNNLGGIPI IEEKGLLFTV VEALETNYNI
SPSRVYSGPF LTSLNAPIFT ISLFNVTKAA GKEFGTTLLF DLLDHPTVAS GWARSHYSNP
GRSTYKSRII KDFKGYEEME TSSHVDVRID QALLKRIIKT SAKNVIDREP DITVWDTKMG
DGDCGKTLET GANAVIQALE RGAFEDGSVI NAIQVVLKII KEDMGGTLGA ILFIFVRGFL
NNFEKLIEIT DSVNTFTYSE ALKKATEVLN KFSTARIGDR TIMDVLVPFV EEFYKTHDIE
LAISVAQEAA ENTRKLTPKL GRATYVGIDD QTEFPPDPGA YGVYEIIRAF QLINH