Gene PICST_52325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_52325 
SymbolOYE3.3 
ID4851567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp2161048 
End bp2162355 
Gene Length1308 bp 
Protein Length435 aa 
Translation table 
GC content45% 
IMG OID640393275 
ProductNAPDH dehydrogenase (old yellow enzyme) (OYE32) (OYE32) 
Protein accessionXP_001388038 
Protein GI126274880 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.93433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00321692 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGAACT ACAAGACTTC TCTTGATGAG ACTAATCTCT TCAAGCCTAT TAAGGTTGGC 
AACCTCCAGC TTGAACATAG AGCGGCCCAC GCTGCGACTT CGAGAGCCAG ATCAGTCAAT
TTCACCCCGA CAGACATCAT GCTTAAGTAC TACGATTCTC GTTCCAAATA CGCTGGAACT
CTCATAGTTG TTGAATCTGT TCTTGCTTCT CGATCGAGCG GTTTAGTGCC ATTCAAATCG
GGATTGTGGC TAGATTCTCA GGCTCAGGCT TTTCGTAAAA TCACAGATTC TATCCATGCC
AACGGCTCAT ATGCGGCTAT CCAGTTGTTT TCACCAGGAC GTACTGCTAA CTTGGACTTG
CTTGAAAAAC ACCTACTTCC ATTTGTTGCT CCTTCGGCCG GTTTGTATGT CTCAGAAGCT
CTGAAGGCTA AGGCACTTGA AAAGGGTAAC AAGTTGAGAG CCTTGAGCGT AGAAGAAATC
CATGAAGTTC AAAACGAATA TGTAGCCAGC GCTGTTAATG CCGTGACCAA CGGAAACTTC
GACATAATCG AGATCCACGG TGGCTCTGGT CACCTTGTAG AACAGTTCTT GTCTCCGATT
GCTAATATAA GATCAGACAA GTATGGTGGA AGTGTTGAGA ACAGAGCTAG ATTTGTTCTT
GAACTCATCG ATAAATTAAT CGAGCATCCA GCTATAGGAG CCTCTCGTGT AGCATTACGT
TTGTCGCCTT GGTCAGATAC CAATGGTATG GTTTATCCAG AAAATATACC GTGCAGTGAA
AACCCTACTT TGCTTGCCTG TCAATACATT GCACAGCAAT TGCAAGACAG GGCAGACGAG
GGCAAGGAGG TTGCTTATTT GTCAGTTTGT GAGCCTAGAG TGTCTGGTTC TGGCGATGCT
GACCCTACGG GAAAGTCAAA CGAGTCGATC TACAGGCTCT GGAAGGGAGT ATTGATGCGT
ACTGGAGGAT ATGCCACCAA CTTCAAAGGT GATCCTTTGG CTATCAAATC CAATGTGGCC
AGATTGAAGG TTGTGAATGG CGAAGTGTTA CACTACCAGG ATCTTATCCA CGATGTCAAC
GTAGACGACA GAACATTGAT AGGATTCTCC AGACCCTTCA CTTCAAATCC TGATTTAGTA
ACCAGGTTGC AGAAGGGCTG GAAACTCGAC GTTTACGATA GAGACTATTT CTACAGCCAT
ACTGTCGATG GTTATTTGAC ATTCGGAGAG TATAATAACG ATGAGGACAA CAACCATTTG
CAGTTGTCGC CCGAGGAGTT GTCCAGAGAG GGTGTTCCAT TGGTGTAA
 
Protein sequence
MTNYKTSLDE TNLFKPIKVG NLQLEHRAAH AATSRARSVN FTPTDIMLKY YDSRSKYAGT 
LIVVESVLAS RSSGLVPFKS GLWLDSQAQA FRKITDSIHA NGSYAAIQLF SPGRTANLDL
LEKHLLPFVA PSAGLYVSEA LKAKALEKGN KLRALSVEEI HEVQNEYVAS AVNAVTNGNF
DIIEIHGGSG HLVEQFLSPI ANIRSDKYGG SVENRARFVL ELIDKLIEHP AIGASRVALR
LSPWSDTNGM VYPENIPCSE NPTLLACQYI AQQLQDRADE GKEVAYLSVC EPRVSGSGDA
DPTGKSNESI YRLWKGVLMR TGGYATNFKG DPLAIKSNVA RLKVVNGEVL HYQDLIHDVN
VDDRTLIGFS RPFTSNPDLV TRLQKGWKLD VYDRDYFYSH TVDGYLTFGE YNNDEDNNHL
QLSPEELSRE GVPLV