| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_52044 |
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| Symbol | MDR5 |
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| ID | 4851382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | - |
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| Start bp | 1654909 |
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| End bp | 1656555 |
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| Gene Length | 1647 bp |
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| Protein Length | 549 aa |
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| Translation table | |
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| GC content | 41% |
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| IMG OID | 640393090 |
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| Product | multidrug-resistance transporter |
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| Protein accession | XP_001387960 |
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| Protein GI | 126274439 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.114118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCGA AAAAGGAGAA ACAAGAAATC TTCGAAGAGA GTAATGCAGG AGATGGGACC
AGGAGAGAAG ATCAGTACAT TGGCGGGTAC AAATTGATTA TTGTCGTCAC GTCACTCCTA
ATAAGTATGC TTCTTTCTGT TATGGATGCC ACAATTGTTG TGACCATTCT TCCTCAAATC
TCCAACAAGT TTGATGGCTT TGAAAAGATC AACTGGCTCA CTTCCGGTTT TCTATTAGCA
ATTGCCCTGT TGACAGCTAC TTGGGGAAAA CTTTCAATTG TCATTGGGAG AAAGTTGGGT
ATAGTCCTTT CCATTATTAT CTTTATGATT GGCTCTTTGG TGTGTGCTTT GGCGAATAGT
ATGGACATGC TCATTGGTGG AAGGGTTGTG GCAGGTGTCG GTGGTGGCGG ACTTCAGTCA
TTGGTTCTTG TTGTCTTGAC TGAAATTCTT CCTATAGAAT ATAGAACTTT TGGTATCATG
CTTTTGTCAA TAACAACAGC TCTTGGTTCT GTCATTGGGC CTTTGATTGG AGGTGCATTT
TCTAGATTTG ACTGGAGGTG GTGCTTCTAT ATAAACTTAC CAGTTGGTGG GTTATCGCTT
TTGTTGTTGG TCGCTGTATT CAATCCGCCT GCGCCAAAGG GAAAGATAAA AGACAAGATC
AAAATGATCG ACTATTTTGG AACATTCCTA CTTAGTAGTG GGTCAGTCTT GGTATTGCTT
GCTTTAAGTT TCGGGTCTTC GTACCAATAC ACTTGGAATT CTGCAGCTTT TATTTCTTGC
ATTGTGATTG GGGTCATTTC TTCCGTCTTA TTCTGTGTAT GGAACTACAA CTACTCGAAA
TACCCTCTTA TTCCTCCAGA AATTACTGAG GTGCTTCTGT TGGATGCCAC AGTGATTACA
GCTACGGCAA TGTTTGGGTT TTTCTTTGCC AATCAAATCT ACTTGTCAGT GTACTTTCAA
TCCATTAAAG GCATGGACGG CTGGCATTCA GGTCTTCATT TATTGCCTAT TATAGTCTCT
TCTGTCGTCA GTACTCTCAT TGGAGGTATG ATTTCTCAGA TTACAGGATA TCTCAAACCA
ATCTCAATAT TAGCAGGTAT TATTGGTGTG GTAGGCAATG CTTTATTATA CCTTTTGAAA
GTCGATTCCA GCTTAGGGAA GATCATTGGA TTGTTGATTT TACCTGGCAT TTCGTCTGGT
TTGCAAATCC AATCTACAGC AATGTTGTCC CAAGTATCTG CCCCCAAAAC TCCTGGAGGT
ACAATTTTGG CTACTACCTT GTACACTTTC GGTAGAACAA TGGGCGGTGC AATTGGCTCC
GAGCTTGCTA CTCTCACGTA TAGTGAGTCT CTTAAACATA TATTTAAACG AGCTTTAAAG
CACGAGACCA ACTCAACAGT TTTGCAAGAC ATCCAGGAGA TCGGTTTCGG CTCCTTATTG
GAAAACACCT CATTACTTGC AAAGTTACAT CCGGTGACTC AAGAATTCTT CAAGGCACAA
ATGATGAAAT CAATTGTAAA TGTGTTCCAC ATGGGAACAG GTCTCGCTGC CTTAGCATTG
ATTGCATCCG TATTTCAAAG CAACTTAAAA GTTCCGAAAC AAAGTAAGGG AGTCGATGAA
GATAACGACC AAGAAGAGAA TACAGAC
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| Protein sequence | MAAKKEKQEI FEESNAGDGT RREDQYIGGY KLIIVVTSLL ISMLLSVMDA TIVVTILPQI
SNKFDGFEKI NWLTSGFLLA IALLTATWGK LSIVIGRKLG IVLSIIIFMI GSLVCALANS
MDMLIGGRVV AGVGGGGLQS LVLVVLTEIL PIEYRTFGIM LLSITTALGS VIGPLIGGAF
SRFDWRWCFY INLPVGGLSL LLLVAVFNPP APKGKIKDKI KMIDYFGTFL LSSGSVLVLL
ALSFGSSYQY TWNSAAFISC IVIGVISSVL FCVWNYNYSK YPLIPPEITE VLLLDATVIT
ATAMFGFFFA NQIYLSVYFQ SIKGMDGWHS GLHLLPIIVS SVVSTLIGGM ISQITGYLKP
ISILAGIIGV VGNALLYLLK VDSSLGKIIG LLILPGISSG LQIQSTAMLS QVSAPKTPGG
TILATTLYTF GRTMGGAIGS ELATLTYSES LKHIFKRALK HETNSTVLQD IQEIGFGSLL
ENTSLLAKLH PVTQEFFKAQ MMKSIVNVFH MGTGLAALAL IASVFQSNLK VPKQSKGVDE
DNDQEENTD
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