Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_51795 |
Symbol | SEO3 |
ID | 4850889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | - |
Start bp | 337604 |
End bp | 339097 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | |
GC content | 40% |
IMG OID | 640392597 |
Product | Suppressor of Sulfoxyde Ethionine resistance |
Protein accession | XP_001387713 |
Protein GI | 126273849 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.289037 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GACAACGAAG AAACACCGTG GATAGACCTA TCGGCCTATG ATGTTTCCAA CAGCGAAAGA GCTACACCTC AGCTTTCTCC TGATTCCTGG CTCTACAAGA TCAAACGGTT CTTCAATGAC AAGATTGACA AACATCCTCT TGAACAAGAC TTCGTCACCA AATTGGATTT CTTCCTTCTT AGCTCAAGTA TGCTCGGATA TTTTATAAAG AACTTGAATC AGTCTAATAT CACCCTTTCC TACAACAATG GAATGGACGA ATACTTTAAA ATGGACAAAA ACCAGTATAA CTACCTTCTC TCCGTCTGGA CCGCGGGGTA TATAATCGGT CAGATTCCTT CCAATTATGT CATCCATCAT AATCTCATCA ACTTCAGATA CTTTCTTGGG TCAATCCAAA TAAGCTGGAG TTTCATAGCC ATCTTACAGT ATAGAGCAGA ATCGTTGAAC GAACTCTATG TACTCAGATT TATTCTTGCC CTCTTAGAAG CCCCTCTCTT TATTTCACTA GAATATCTTC TAGGCAGCTG GTACTCTCCT AGGGAACTCA ATAAGAGATC TACGTATTTA GCAATCAGTT CAGGATTGGC TTCCATAATT GCTGGTCCAC TTCAACAAAT AATTATAGAG TTCTCAAAAG ACACAGACAC TCCTCCATTC AAACTCAATT TCATCTTAGA TGCGATTATC AGTTTCCCCA TAGCATTATT TACTTTCATC GCCAACCCCA ATGTTCCATC CAATACCAAT AATTTCTACT GGAATGAAAC GGACAAGTTG GTAGCCTTGG AGAGAAGAAG GTTGATAGGA GCACAGACTA CAAAGAAGAA AGCAACCAAA GGCTTCAAGT ACTATAAACG GTATTTTAGC AGATGGCAAG TGTTTGTCTT CCCACTTATC TTCTGGGGGT TCAATAATTC TGGACATGCT TCAAGCCAAC CCACTATGGT CAGTTGGATG AAAATTGACT TGAAGTTGTC TTCTGAATAC TACAATTTGA TCCCCTCCAT CTTTCATGCT ATTGGTATTG CAGCTGCTCT ATTAGTTGGA TACGTCAATG ACTATCTAGG AGGAGTACAC AACCATGTAT TTATCAAGGT ATTTTTTATC TCAATGGTAG TAGGTTGTGT ACTCTTGAGC TATTGGGACT TGCCCTTATG GTTACATTGG TTCGCCTACT TTTTGATAAC TGTTCCTGGA TCCTGGGGTC AACCGCAGAT CTTCTCATGG GTGAACCGTA TACTTGTGAA GGATGATTCT ATGAGAAGCT TTGTTATTTC GGTGACGAAT ACCTTTGCGT ATGTCATTGG GTGCTGGGTT CCAGTTTTTG TATGGAACAC AGCAGATAAA CCTCAATATT TTGTCGGTTT TGTCTACACT GCATGCCTCA GTTCATTTGG CTTGATAATG ACTTACGTTG GAGACTATTT GACCAGACGA GATGAATTTA GAGAAAAGTA CAATGGTGTC ATCGAAGTAG AATTAAGCTC TTGA
|
Protein sequence | DNEETPWIDL SAYDVSNSER ATPQLSPDSW LYKIKRFFND KIDKHPLEQD FVTKLDFFLL SSSMLGYFIK NLNQSNITLS YNNGMDEYFK MDKNQYNYLL SVWTAGYIIG QIPSNYVIHH NLINFRYFLG SIQISWSFIA ILQYRAESLN ELYVLRFILA LLEAPLFISL EYLLGSWYSP RELNKRSTYL AISSGLASII AGPLQQIIIE FSKDTDTPPF KLNFILDAII SFPIALFTFI ANPNVPSNTN NFYWNETDKL VALERRRLIG AQTTKKKATK GFKYYKRYFS RWQVFVFPLI FWGFNNSGHA SSQPTMVSWM KIDLKLSSEY YNLIPSIFHA IGIAAALLVG YVNDYLGGVH NHVFIKVFFI SMVVGCVLLS YWDLPLWLHW FAYFLITVPG SWGQPQIFSW VNRILVKDDS MRSFVISVTN TFAYVIGCWV PVFVWNTADK PQYFVGFVYT ACLSSFGLIM TYVGDYLTRR DEFREKYNGV IEVELSS
|
| |