| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_51244 |
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| Symbol | YPT52 |
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| ID | 4851477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009068 |
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| Strand | + |
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| Start bp | 1926078 |
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| End bp | 1926716 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 640393185 |
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| Product | GTP-binding protein of the rab/ypt family |
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| Protein accession | XP_001387608 |
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| Protein GI | 126274605 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1100] GTPase SAR1 and related small G proteins |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AGTAATAAAT TCGCTCAGTT CAAGCTAGTG CTTCTCGGAG AGTCTGCGGT GGGCAAATCT
TCCATAGTGC ACCGTTTCGT CAAAAACACG TTTGATGACA TGCGAGAATC GACAATCGGA
GCTGCGTTCT TGACTCAGAC CATCAACCTC CCGGAATCAA AGACAACGAT CAAGTTTGAG
ATTTGGGACA CAGCCGGACA AGAAAGGTAT AAGTCGCTTG CACCAATGTA TTACCGGAAT
GCTAACGCTG CACTCTGTGT CTACGACATT ACGAGTCGCT CTTCTTTCGG CAAAGCGCAA
GATTGGATCA AGGAATTAAA GAAACAGGCA CCAGAAGGTA TTGTGATTGC GCTTGTTGGA
AATAAGTCGG ATTTAGAAGA AAGTCGTGAA GTTGATTCGG CAGAAGTCGA GGAATACGTC
CAACAGGCAA ACGAGGACGG CAATACTATC ATTATCTCCG ATTGTTCAGC TAAACTGGGC
CAGGGAGTCT TAGAGATATT CACCCAGATT GGCAGGGCCC TACCTGTGGA CGAGGTAATA
GCAGGCAGCG GCGGAAGAGG ACGACCAGCA GGGAGAAGAG CTGGCGGAGT TGATTTGAAC
AGAGCCAGAA GACCCGAGGC TGCAAGTGGA TGTTGTTGA
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| Protein sequence | SNKFAQFKLV LLGESAVGKS SIVHRFVKNT FDDMRESTIG AAFLTQTINL PESKTTIKFE
IWDTAGQERY KSLAPMYYRN ANAALCVYDI TSRSSFGKAQ DWIKELKKQA PEGIVIALVG
NKSDLEESRE VDSAEVEEYV QQANEDGNTI IISDCSAKLG QGVLEIFTQI GRALPVDEVI
AGSGGRGRPA GRRAGGVDLN RARRPEAASG CC
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