Gene PICST_50184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_50184 
Symbol 
ID4840805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009048 
Strand
Start bp501550 
End bp501888 
Gene Length339 bp 
Protein Length112 aa 
Translation table12 
GC content43% 
IMG OID640392120 
Productpredicted protein 
Protein accessionXP_001386688 
Protein GI150866926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.913738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTTGATGCGC TAACAGAAAG TAACGATTTG ACAGTGATAA GAGCGCAATT GTCTTCTGAC 
GAGTTGGTCA ACAACCAGGA CATAGAGCAT ACAGAGTCGT TGATTGAAGA AAGTAGACTG
CAGAAAGAAT ATGAGTCGTC GTTAACGAAA TTTGACCTCT GGGATATAAT AAAAAAGGGT
TCTATCAATT TGGTGTTACC TTTTATTAAT GGGATGATGT TGGGGTTCGG CGAGATATTG
GCACACGAGA TTGGCTTTCG TTACAACTGG GTTGGGGCCA GGGTGCAGCC GGTCAGAAGA
TTAGAACAGA GACAGAAGAG AGAGTCCAAG TTCTTGTAG
 
Protein sequence
VDALTESNDL TVIRAQLSSD ELVNNQDIEH TESLIEESRS QKEYESSLTK FDLWDIIKKG 
SINLVLPFIN GMMLGFGEIL AHEIGFRYNW VGARVQPVRR LEQRQKRESK FL