| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_49633 |
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| Symbol | TFB3 |
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| ID | 4840611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009047 |
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| Strand | + |
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| Start bp | 660145 |
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| End bp | 661194 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640391926 |
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| Product | RNA polymerase II transcription factor B subunit 3 (RNA polymerase II transcription factor B p38 subunit) (RNA polymerase II transcription factor B 38 kDa subunit) |
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| Protein accession | XP_001386138 |
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| Protein GI | 150866509 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG5220] Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB3 |
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| TIGRFAM ID | [TIGR00570] CDK-activating kinase assembly factor MAT1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.303596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.116079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCCA AGTTTCAGTC ACTAACCATA TCTCTAGATG ACCGGTCCAA GGACATGTGT
CCCATCTGTA AAACAGACAA GTACTTGTCT CCGAATATGA ACTTTCTCAT TAATCCAGAA
TGCTACCACA AAATTTGCGA GTCTTGTGTG GACCGTATAT TTTCATTAGG TCCAGCTCCA
TGCCCGTATG CGAGTTGTGG GAAGATCTTG AGAAAGAACC GGTTCAAGAA ACAGATCTTT
GATGATTTAC GAATCGAGCG AGAAATCGAT ATCAGAAAGA GAGTAGGAAG TGTCTACAAT
AAGACAGAGG AGGACTTTGA TGATCTTAGG GAATTCAACA AATACTTAGA GACGATAGAG
AATATAATAT TCAATTTGAA TTACGGAATC GATGCTGAAG AGACCGAGGC TGATTTAGTC
AAATACGAAC AAGAACATAA ATTAGAGATA TTAGAAAAGA ATATGCGTCA AAGTCAGAAG
AACGCGGATT TGGCTGCTTA TCAGGAAGCC ATGGAAAGAC TCAAGCAGGA AAAGTTACGA
ATTCAGAAAC AAATGGAAGT AGAAGACATG GAGTACCAGA AACAGCTGCA ACAAGATTTA
TTAGACAAGT TGACAACTGG CTCTGCTTCC AGCACTGACG AGATTATCAA ACAACAACAG
CAAAATGCAT TAAAACGTTC TTCCTTGAGA AGAAGAGAAT TGCAACAGAT AACCAACCAA
TTAGATCAAC AATTCAATAA GTCAAACCCG TTGTACAAGC ATGCTAAGGA ATTGGAAGAA
AACTTAAAAA CACCATTTAC ACCATTTAAG GGTGATAGAG ACCTAAACAA GAACTACCAC
TTATTGCCTA TACCGAACGA CATCGACGAG CTCATGGATA TCGAAAACCA CATCTCTGAC
AGCTACTTCG ATCCATATGT AAACCAGCTA GCCAAGAACA AAGAGTACTT GGGAGCCGGC
TGGAGATTGC AGCATGTATT TGAGAAAGCA TTGGATGAAG CATTCATTGG ATTGGGTTGT
TTCATCGAGA AGGAAAAGGC AACAGCCTAG
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| Protein sequence | MPSKFQSLTI SLDDRSKDMC PICKTDKYLS PNMNFLINPE CYHKICESCV DRIFSLGPAP
CPYASCGKIL RKNRFKKQIF DDLRIEREID IRKRVGSVYN KTEEDFDDLR EFNKYLETIE
NIIFNLNYGI DAEETEADLV KYEQEHKLEI LEKNMRQSQK NADLAAYQEA MERLKQEKLR
IQKQMEVEDM EYQKQSQQDL LDKLTTGSAS STDEIIKQQQ QNALKRSSLR RRELQQITNQ
LDQQFNKSNP LYKHAKELEE NLKTPFTPFK GDRDLNKNYH LLPIPNDIDE LMDIENHISD
SYFDPYVNQL AKNKEYLGAG WRLQHVFEKA LDEAFIGLGC FIEKEKATA
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