Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_49344 |
Symbol | ETF4 |
ID | 4840625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009047 |
Strand | + |
Start bp | 762835 |
End bp | 764607 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640391940 |
Product | ETF-ubiquinone oxidoreductase |
Protein accession | XP_001386159 |
Protein GI | 126139273 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.148301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.324248 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AACAACGAAG TCCCCTATGA AAAGTTGTCC AACGAGGAAA AGGAACTCTT GGCCGAGCCC AGAGCCTCGG ATGTAGTCGA TGTGTGTATT GTAGGGGGTG GCCCTGCTGG TTTAGCTACG GCAATCAAAC TCAAGCAATT GGATAACGAG ACTGGGTCAG GCGAATTGCG AGTAGTAGTA TTGGAAAAGG CCGGAGACTT TGGCTCACAT ACTGTGAGCG GGGCCGTAAT AGAGCCTGGT GCTTTCAGGG AGTTGTTCCC CAACAGCGAA TATACTGAGC AGACTGGAGG CATCCCTCTT CCTCCAGATA TGGTCACCAA GGTAACTCAC GATGCAATGA AGTATTTAAC TGAAAAGAAA GCGTATTGGT TGCCTGAGCC TCCTCAATTG GCCAACAAGA ACAAGAATTA CATCGTGTCA TTGAGTAACG TAGTCCGATA CTTGTCTGAG CAAGCTGAAG AGTTGGGCGT GGAATTGTAT CCTGGAATTG CTGTGTCTGA GTTGGTGTAC AATGAAATGG GAGATGCTAT TAAGGGTGTG GCTACGAAGG ATTTGGGTAT TTCCAAGAAA GGTGTGCCTA AGAGCTCATT TGAACGAGGA ATGGAGTTCC ATGCCAGAGT CACTGTTTTG GCCGAAGGAT GCCATGGATC ACTAACCAAA GAAGCTGTTG CCAAGTTTGA CTTGAGAAAG GACAGTGATC CTCAGACTTA TGGTTTGGGT ATTAAAGAAG TCTGGGAAGT CGACCCCAAA AAGTTCAACA AAGGTTATGT AGGCCATTCG TTGGGTTTTC CACTTTCCAC CCAAGAATAT GGCGGTGGAT TCATGTACCA CTTTGGAGAT GGTCTCGTAG CGGTAGGATT GGTTATCGGT TTGGACTACG CAAATCCCTA CGTTTCACCC TATCTTGAGT TTCAAAAGAT GAAAACTCAT CCATATTACG CCAATGTGCT AGAGGGAGGA AAGTGTATTT CGTACGCAGC CAGAACTTTA AACGAAGGAG GCTATCAGTC CATTCCTCAG TTACATTTCC CTGGTGGAAT CTTGGTAGGT TGTTCTGCTG GTTTCGTGAA TGTCCCCAAG ATCAAGGGTA CCCATACAGC TATCAAGTCT GGTATTGTTG CTGCTCAAGA AATCTTTAAC ACAGTCAAAG AGTTGGACCC AGTAGAAGAA GAAACTTTTG AAGATGAAGT ATACAATCCA ATTGACTTGG TAGCCTACGA GAACTCGTTC AAGGACTCCT GGGCGTACAA GGAGTTGTAT GCTGTGAGAA ATTGTCGTCC AGCATTTAAC ACTGCTCTTG GATTCCTTGG TGGTTTGAGT CATTCTGGGT TCTCGACTAT GATCTCATTT GGTAAAGAAC CATGGACATT GGGTATCCAC CATACTGATG CTGATGCTAC TCATCGTGCT GATAACTACA AGCCTAAAGA ATACCCTAAG CCAGATGGAA AGTTGACCTT TGACATCTTG ACCTCAGTCT CCAGAACTGG TACTCATCAT GATGAAGATG AAAGGTGTCA TTTAAGAATT CCAAACCAAG ACTACACCAG ACACGCTGCT ATGACGTTCC CAGCTTACAA AGGTATCGAA CAAAGGTTCT GTCCCGCTGG AGTTTACGAG TTCATTGAGG ACGACAGTGA GTTGGGAATC AAGTTCCAGA TCAACAACCA GAATTGTATT CATTGCAAGA CTTGTGACAT CAAGTCACCA ATGCAAGACG TTACGTGGAC AGTTCCCGAA GGAGGAGATG GTCCAAAGTA TTATATGACC TAA
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Protein sequence | NNEVPYEKLS NEEKELLAEP RASDVVDVCI VGGGPAGLAT AIKLKQLDNE TGSGELRVVV LEKAGDFGSH TVSGAVIEPG AFRELFPNSE YTEQTGGIPL PPDMVTKVTH DAMKYLTEKK AYWLPEPPQL ANKNKNYIVS LSNVVRYLSE QAEELGVELY PGIAVSELVY NEMGDAIKGV ATKDLGISKK GVPKSSFERG MEFHARVTVL AEGCHGSLTK EAVAKFDLRK DSDPQTYGLG IKEVWEVDPK KFNKGYVGHS LGFPLSTQEY GGGFMYHFGD GLVAVGLVIG LDYANPYVSP YLEFQKMKTH PYYANVLEGG KCISYAARTL NEGGYQSIPQ LHFPGGILVG CSAGFVNVPK IKGTHTAIKS GIVAAQEIFN TVKELDPVEE ETFEDEVYNP IDLVAYENSF KDSWAYKELY AVRNCRPAFN TALGFLGGLS HSGFSTMISF GKEPWTLGIH HTDADATHRA DNYKPKEYPK PDGKLTFDIL TSVSRTGTHH DEDERCHLRI PNQDYTRHAA MTFPAYKGIE QRFCPAGVYE FIEDDSELGI KFQINNQNCI HCKTCDIKSP MQDVTWTVPE GGDGPKYYMT
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