Gene PICST_48294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_48294 
SymbolAKR5 
ID4839772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp53227 
End bp54198 
Gene Length972 bp 
Protein Length323 aa 
Translation table12 
GC content43% 
IMG OID640391087 
ProductAldo/keto reductase 
Protein accessionXP_001385696 
Protein GI150866188 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.101593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAT CCGCCTCCAA GCCTGTTGAG CTCACCCACA ACTTCACTAC TAAGTCTGGA 
AAACCTATTA CCCTTGGTAC TGGAACTGGA ACTAAATGGC AGTGGCTCAA GAAAGGAAGA
CCTGAAGAAG AGCAGAACAC TTTGACTACT GAATTGGTAG ATCTGATCTT ATTGGCTCTT
GAAAATGGGT ATAACCACAT CGACACTGCC GAGGTCTATA CTACCCATCC CGAGGTTGCT
GCTGCTGTCA AGAAATCAGG AATCGCCAGA GAAGACTTGT TCATCACCAC CAAGTATACT
CCAGGGTTCC GTACATTCCC TGCAATTTCT AGTGGTCCTA CTGAGTTCAT TGATAGAGCA
TTGAAGGAAT TGGAAACGGA TTACGTAGAT TTGTTCTTGA TTCATTCCCC TTTTTTTGAA
GAAAAGGTCT CTAGAGGTCA GACCTTGGAG AGCGCCTGGG CTGAAGTCAT TGATGCTAAA
AAGGCGGGAA AGGTGAGACA TATTGGTGTT TCAAACTTTT CGAAGGAACA CTTGGAAAGG
ACGTTCAAAG TTGCTGGTAA CCCTGACTTC TATCCTAAAG TCAACCAGAT TGAATTCCAT
CCATATTTGC AGAACCAATC GCCTGGCATC ATCAAGTTTG CTCAGGAGAA CGATATCTTG
ATTGAAGCAT ATGGACCACT TAGTACATTG TTCAGAATCA AGCAGAATGG TGTAGATGTG
GAGGACCATC CTTTGAAGGA GCTCATTCCT AAGTTGGCTG AAAAGTACGG CAAAACCGAT
GCTCAGATCT TATTGAGGTA CACGTTGCAA AAGAAGATCT TACCCATTAC CACGTCATCA
AAACTCGACA GAATTAGACA ATCATTGGAG GTCTACAACT TTGAGATTTC AGACGAAGAC
GTAGCTGAGA TCGACAAGAC CGGCTCTAGC TACCATTTCA GACAATTCTT TGTAGAGGAG
TATGATCATT AG
 
Protein sequence
MTKSASKPVE LTHNFTTKSG KPITLGTGTG TKWQWLKKGR PEEEQNTLTT ELVDSILLAL 
ENGYNHIDTA EVYTTHPEVA AAVKKSGIAR EDLFITTKYT PGFRTFPAIS SGPTEFIDRA
LKELETDYVD LFLIHSPFFE EKVSRGQTLE SAWAEVIDAK KAGKVRHIGV SNFSKEHLER
TFKVAGNPDF YPKVNQIEFH PYLQNQSPGI IKFAQENDIL IEAYGPLSTL FRIKQNGVDV
EDHPLKELIP KLAEKYGKTD AQILLRYTLQ KKILPITTSS KLDRIRQSLE VYNFEISDED
VAEIDKTGSS YHFRQFFVEE YDH