Gene PICST_48184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_48184 
Symbol 
ID4840044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp999986 
End bp1000897 
Gene Length912 bp 
Protein Length303 aa 
Translation table12 
GC content41% 
IMG OID640391359 
Productpredicted protein 
Protein accessionXP_001385884 
Protein GI150866328 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTGACTAGCT CTAAGTCTGA TGTAACCTCT TTCTCAATTC CAAGCAATTT AGATATCTCT 
ATCGGTATCG CAAGTGTTAA GGACTATCGT CGAGTGGCAA AGACTTTGTT GCTCTCGTTT
GAAGACGATC CTTTCATGAA CTACATTCTT AACACTTCGC AGATTACCAA GGAGAATACA
CCAAAGTCGG CCTACAAGAA GAAAAAGTTG GACTTGATGC AAGCATACTT CGAGTATGAC
GCATACGAGT GCATCTCCTT GGGCGGAACT ATCTTCATTG TCAAGGACAA TTCGTTTGAG
GCTACCTTGG ATGACTTAGG CGTCAAGAAG TACAAATTTC CCTATCTTGG TGTTGCTCTC
TGGAATCAGA TCTACGGTGC TGACTGCAGC TCGTCCGGTT CTGATTCCGA TGACGACAGT
GGGGAGATCT TTGCTTCGAG CAACTTAAGA TTCTTCGATA ACATCCACCC TTCTTACTTC
AAGTTCAATG TTTATTCTAT TCTTGGAAAT TGTAGATCAA AAGTCTTGAA TGATAAGCTC
CCATTCTTGA CCAAAGTGAG AAAGGAGGTG TTAGTTAACA AGTTGATTAA GAAGCCAGAA
TTAAATAGGA ATGGGCTGAT TGACATTTGG TATTTGAATG ATATTGCCAC TTTGCCATCA
ATGAGAGGTA AGGGTTTGGG TAAGATCTTG ATCCATCACA GCTTGGAGGA GTTCAAGAAG
CAAAACCCTT ACACCTACGC CTATTTGGAA AGTTCTAATC CAAACAATCG TAAGTTCTAC
TTGAAGTTAG GCTACAAGGT GATGACAAGC TTTTCTATCA AGTATAACAA GATTGTTGAC
AGCGACAAAA TTGCGGAGAT TGATCCCAAG AATGAAGCTA TCAACATGGA TTCCATGCTT
TTCTTTCCTT AA
 
Protein sequence
STSSKSDVTS FSIPSNLDIS IGIASVKDYR RVAKTLLLSF EDDPFMNYIL NTSQITKENT 
PKSAYKKKKL DLMQAYFEYD AYECISLGGT IFIVKDNSFE ATLDDLGVKK YKFPYLGVAL
WNQIYGADCS SSGSDSDDDS GEIFASSNLR FFDNIHPSYF KFNVYSILGN CRSKVLNDKL
PFLTKVRKEV LVNKLIKKPE LNRNGSIDIW YLNDIATLPS MRGKGLGKIL IHHSLEEFKK
QNPYTYAYLE SSNPNNRKFY LKLGYKVMTS FSIKYNKIVD SDKIAEIDPK NEAINMDSML
FFP