Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_47700 |
Symbol | |
ID | 4839843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 1065085 |
End bp | 1065807 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640391158 |
Product | predicted protein |
Protein accession | XP_001385559 |
Protein GI | 150866082 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.106047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.135513 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCATAT CTGGTGAAAA GTTTGATTTT CTAGAACAGC TTCCCTTTGC CGATGGCAAA TTTGAAGCCA CCGGCAGAAT CACCACTCCT ATTACTTTCA CGCTTGAAAA AGACTCCACC AAAACTGTTA CTCTTCTTCC AGTCCATGAG TATACCGAGA TTCCGGACAA TCTCGTTCAA GTCGTCCAAG ACGAGTTCAA CTACATTGTG GAAGAGGGCC AGACGTATCC CCACCACCAG ACGTTGACAC ATGACGATTT TGTCAAATAC TGGTTCAGTG GGTTTGTAGC TATACTCATA GAAGGTGAAC ACCAATCGGC CCTCGACGAC GACTTGAAAC TGTTGTCGGT ATCTCAATGG CGAGACATTT TCCTCGGGAA CTTCTACATC AAGCCAAACT ACATTGGCAG ATGTTCACAT GTGTGCAACG CCGGTTTTGT TGTCAACCAC GAGAAACGAG GTTTGGGCCT CGGGAAGGAA CTCGGAAGAA AGTACTTGGT ATGGGCTCCA CAATTGGGGT ATGTGTATTC GGTTTTCAAC CTTGTTTTTG AGACAAATAT CGCCAGTTTG AAGATTTGGG ATGGATTGGG ATTCGAAAGA ATTGGATATG TCAAGAATGT CGCTGTTCTT AAAGGTCATA AGCATTTAGT AGGTGCACAT ATGTTCGGTA AGGACTTGGT TTCTGAAAAA GGCATTGAAG CAGCAGAAAA CGGAAAAGTA TGA
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Protein sequence | MSISGEKFDF LEQLPFADGK FEATGRITTP ITFTLEKDST KTVTLLPVHE YTEIPDNLVQ VVQDEFNYIV EEGQTYPHHQ TLTHDDFVKY WFSGFVAILI EGEHQSALDD DLKSLSVSQW RDIFLGNFYI KPNYIGRCSH VCNAGFVVNH EKRGLGLGKE LGRKYLVWAP QLGYVYSVFN LVFETNIASL KIWDGLGFER IGYVKNVAVL KGHKHLVGAH MFGKDLVSEK GIEAAENGKV
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