Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_47586 |
Symbol | |
ID | 4839829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 1015250 |
End bp | 1015645 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 12 |
GC content | 51% |
IMG OID | 640391144 |
Product | predicted protein |
Protein accession | XP_001385550 |
Protein GI | 126138054 |
COG category | [R] General function prediction only |
COG ID | [COG2118] DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGACT CGGAGTTAAA CGCCATCAGA GCAGCCAGAT TAGCCGAGCT TCAGAAGCAG ACCGGAGGCA GCTCGGACTC GGGCCAGTCT TCACCTCAAG ACGAAGCAAG AGCCTCAGCA CTCTCGCGAG TGTTAGAGCC TAGTGCCAGA GAAAGACTAA GCAGAGTGCG CATGGTGAGA CCAGAACGTG CGCAGCAAGT CGAGCAGTAC ATTCTCAGAT TGTTCCAGAC CGGGTCCATC AACAGAAAAC TCTCGGAAAA GGACATTGTA GAGATCTTGG ACGGAATAAG TCGTGATTCC AACAAGCAGG CTTCGACCAA GATCATCTAC GATCGCAAAC AGAACACCAT TGACGACGAG GAAGAAGAAG AGGAGGAGGA TGATTTCTTT GACTAG
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Protein sequence | MDDSELNAIR AARLAELQKQ TGGSSDSGQS SPQDEARASA LSRVLEPSAR ERLSRVRMVR PERAQQVEQY ILRLFQTGSI NRKLSEKDIV EILDGISRDS NKQASTKIIY DRKQNTIDDE EEEEEEDDFF D
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