Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_45484 |
Symbol | |
ID | 4838449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 942754 |
End bp | 944124 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640389764 |
Product | predicted protein |
Protein accession | XP_001384484 |
Protein GI | 150865321 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00903178 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0734947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAGA AACCATCATC CAAGCCTATA AGGCAGGATT ACATTGCCAA AGTGCGTTAT ACGAACAACT TGCCTCCACC ACCATTGAAT CCTAAATTCA TACAATATAA CACTACAGAA CAGGTTTCGT CACAGAAGGA AGCCGAATAC CTTATTTCGT CAGTCTTTAG AAAGGAAAAC TTCACTCGTT TGATGGAGAA CATCGACGAG GAGTTAGGTA TGAACTTGAA CTTGATCAAT AATCGTGGCT TTTTGGATAA TGGGGACGAA ACGGTTATCA ACAACTTTGT AACAAAAGAC AGTGGTAATA GTAATAGCAA CAAGAGCGGG TTGGTGACGT TGCACCCTCT GGATCGGGCT TTGTTAAGAG ATGCTGGTAT CGGCAAAATT TCCAAGTCGG AGCCTGGTGT TTCGTTTTTG AGAAGAACTG AGTATATCGC CGATATGCAT GTAGCTAAAG TTAATGATGA ACTTGAAGAT TCGAAAAAGA AGAAGAAGAA TACAGCCGAG ACTCATGATC CTGAGGCTCA GTTACGTGCT GTGGAAGACA CCTTTGATAA TGCCCAGGAG TCGTTGACTA ATTTCGCACG CTTGAAGCAC CCCAAGAAGA AGCATTTGAA GGCTGTGGCT GCCTGGCCGT TATTGCCGGA CACTTCTGCA ATGGACACAA AGTATATTGC TGTCAAATTT TTGGGCTCAG CTTCTATCAG CAGAGAATTA CAAGCCAACA AGAGAAAAGA CAAAAACTAC AACGAGGTTT TGGAGAAGAA TGCCTTGGAG ACAGCTATAT TGAAGCCAAT CACATCTGAT GATGGAGAAT GGATATCGTT TTACGAAGTT CGTGACGCCA ACAAGGCTGT GGAATTAAAC AGCCGCTTGA ACTCCACAGA AAGGGAACGT CCCATTGTCA ACATGCTAGA CGAAGACGTC GAGGGCCAGG AACTGTACAA GTTCAAGCAT TTAAAGAATT ATGATATGAA CTTCAACAGA TTCACTAAGC CCTACGAAGA GTTATCAATC AAATTTATTC CAGAAGAAGT CGGATCGAAG AAGAGGAAGG TAGCATATTA TTACCCGGTT TCGGGACGTA TCGACTTGAA AAAGCATCGT TCCTCTACAA ACTCGGAAAT CAACCGTTTC CTCAAGGACA GTACTGTAGA CGTTATCAAC TTCAAGTTAC GTGAACCAAG CACCAACGAA ATTAAAAAGA TGGATGCTAT TAGATCTGAG TTTGATCCGA TGGAATACGA AGGTGAAGAA GAGGAAGAGG ACGAAGAGGA CGATGCTCAA GCTGACGATG CTCGAGCTGA GGATGTTCGC GATGTTGGTG AAGAATTTAA CGAGGCTTCA AAAACAGATG AGGCCGACTA A
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Protein sequence | MSQKPSSKPI RQDYIAKVRY TNNLPPPPLN PKFIQYNTTE QVSSQKEAEY LISSVFRKEN FTRLMENIDE ELGMNLNLIN NRGFLDNGDE TVINNFVTKD SGNSNSNKSG LVTLHPSDRA LLRDAGIGKI SKSEPGVSFL RRTEYIADMH VAKVNDELED SKKKKKNTAE THDPEAQLRA VEDTFDNAQE SLTNFARLKH PKKKHLKAVA AWPLLPDTSA MDTKYIAVKF LGSASISREL QANKRKDKNY NEVLEKNALE TAILKPITSD DGEWISFYEV RDANKAVELN SRLNSTERER PIVNMLDEDV EGQESYKFKH LKNYDMNFNR FTKPYEELSI KFIPEEVGSK KRKVAYYYPV SGRIDLKKHR SSTNSEINRF LKDSTVDVIN FKLREPSTNE IKKMDAIRSE FDPMEYEGEE EEEDEEDDAQ ADDARAEDVR DVGEEFNEAS KTDEAD
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