| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_4539 |
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| Symbol | ALS1.2 |
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| ID | 4837070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1015371 |
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| End bp | 1016786 |
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| Gene Length | 1416 bp |
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| Protein Length | 472 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388385 |
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| Product | Agglutinin-like protein 1 precursor |
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| Protein accession | XP_001382423 |
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| Protein GI | 150863820 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3889] Predicted solute binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.340377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.951225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTATAG TATTAGCAGT TGCTTTCCTT TTTCTGTGTG TAAGAGCTGC AGTTGTCTCA
GGTGTTTTCA CCAGCTTCGA CTCTCTTGTT TTCCAGAACG GGGGTAACTA TCCATTTGAT
GGACCAGCTA ATCCAAGTTG GATTGCCACT TTGAAATGGC AACTTGATGG CACTAAGGTT
GCTCCTGGTG ACACATTCAC CTTAGACATG CCATGCACTT TCAAGTTCAC ACAAACTCCT
GCTGATGCAC CAGTACTCCT TCAAGCTGGT GGAATCACTT ATGCTACATG TCAAACACTT
GGTGGTGAAA TCATTGTTCC ATATTCTCAA TTACAATGTA CAGTTGAAAA TGCTGTTACC
ACAAGCACCC TTGCCTCAGG ATCTGTTTAT TTTCCAGTTG TATTTAATAT TGGTGGAAGT
GCTACCCCTG TAGATTTGAC CGATTCTAAA TGCTTTGCCA GTGGTGATAA TACTGTTACC
TTCAATGATG GTGACACCAA ACTCTCTATT ACTGCAAACT TTGAAACCGG TTATCCTGCT
TCTGGAGTCA ACCCCACTAA CATCATTTAC AGAAACAGGT TCCTCCCTCA GCTCGGTGAG
AGCCAACACT TGTTAGTTGC TGGTCAATGT CCAAGAGGTT ACACTTCCGG TACTTTGGGA
TTCTCTTTCA GTGGCGGCAA ATTAGATTGC TCTAGTGTTC ATGCTGCAAT TACCAACCAA
TTGAATGATT GGTATTTCCC AACCGACGCA GAGACAGATT TTCTGTTCAC CTATACCTGC
TCTGCTTCTG GCTACCAAAT AACATACAAG AATATTCCTG CCGGTTACAG ACCGTTTATA
GATGGACTTA CGTCGGCTAC CGCAAATTTA CTTACTGTTT CTTACACTAA CAAGTTCGTT
TGTGTCGGAT CCTCTATCAA TAATGACAAG AGCACCAAAG TTACATGGAG TTCTTATCAG
AATTCCGATA GCGGAGGTGA TGGTCATGTC ATTGTTCTCA CTACCTCAAC TGGCACTGGA
TCCAGTACCA CTGTGACTAC CGCTACTGGT AAAAGTACAA ATACTATTAT TGTAATTGTC
CCAACCCCAA CTACAACAAT CACCCAAACT TACACCGGCA CCGTAACAAC CACCACCACC
GTTACTGCCA CTTCCGGAGG CACAAACACT GTCATTGTGG AAGTTCCAAC TTCTTACCCA
CCAAACCCAA CAACTACTGT GACATCGACT TGGACTGGAA CAGAAACTTC ATCCACCACT
GTTACTGATA CACATGGCGG AACTGATACT ATCATAGTTG TGGTTCCTTC GAATCCAACC
ACAACATTAA CATCCACTTG GACTGGAACA GAAACCTCTT CGACTACTGT CACTGACACT
CAAGGTGGAA CTGATACTGT AATTGTTGTA GTCCCT
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| Protein sequence | MLIVLAVAFL FSCVRAAVVS GVFTSFDSLV FQNGGNYPFD GPANPSWIAT LKWQLDGTKV
APGDTFTLDM PCTFKFTQTP ADAPVLLQAG GITYATCQTL GGEIIVPYSQ LQCTVENAVT
TSTLASGSVY FPVVFNIGGS ATPVDLTDSK CFASGDNTVT FNDGDTKLSI TANFETGYPA
SGVNPTNIIY RNRFLPQLGE SQHLLVAGQC PRGYTSGTLG FSFSGGKLDC SSVHAAITNQ
LNDWYFPTDA ETDFSFTYTC SASGYQITYK NIPAGYRPFI DGLTSATANL LTVSYTNKFV
CVGSSINNDK STKVTWSSYQ NSDSGGDGHV IVLTTSTGTG SSTTVTTATG KSTNTIIVIV
PTPTTTITQT YTGTVTTTTT VTATSGGTNT VIVEVPTSYP PNPTTTVTST WTGTETSSTT
VTDTHGGTDT IIVVVPSNPT TTLTSTWTGT ETSSTTVTDT QGGTDTVIVV VP
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