| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_43936 |
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| Symbol | SKI3 |
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| ID | 4838318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | + |
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| Start bp | 182981 |
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| End bp | 187222 |
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| Gene Length | 4242 bp |
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| Protein Length | 1413 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640389633 |
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| Product | antiviral protein |
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| Protein accession | XP_001383322 |
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| Protein GI | 150864486 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGTG TCAAGAAGGC ACTCAAGTTG GCTAAAAGCG CAATCGATCT GGGTGATGCG
GAATTGGCCC ACGAGCACAT TCAGGATGCG CTCAGAACTG ATCCTGAGTC CTACTTTGCC
TATGTATTTC TCGGAAAGGC ATACCAGTTA GAAAATGATA TAGCCAATGC CAATAAAGCT
TTCGAAAGAG CGACTCAGTT GGAGCCAGAG AATATGTTGG CTTGGAGGGG ATATTTGCAG
AGCGTTAAAA GCGAGTCTGA TTATGCGCTT TTTTTCAAGG TTGTCACTCA ATTGATACGA
TTACAAGTAG ATCAAGGTTT TTCTATAGCA GAAACCATAA AGGATATCCG AAACTACTTG
GCTGTGCAAA AGTACAAGAA GAACCCAGTT CTCCATGAAA TGTATCTCCG GCAATTAAAA
CCGGGAGCTG AGCTAGCCGA ACTTGTTGGT TCAGCTCTTG GAAATCCTGT TGATAATCTT
CGAGACTTGA TCAAGTTGAC AGCCAAGAAG TTGGAAGTTG AGGTAACGCA CAAATCGGCA
AAAGAAAGAG TGAAGTATGG TAGGAGATTG ACAGCAAACC AGCAGCTCAA GATGGACAAC
TTCCAATGGG CCATCTATAA GAATACAGAC TTAGAGTCGT TGTACGAAAT GTATCTCAAT
ATAGGCACAA ATGACGACCA GAGAAGAATC TTTGAGGATG ATTTGTTGAA TTTCAGGTAC
CAACTTCTCA AAGTTTGCCC TGAGAAGAAA GAATTGTTGC ACAAGATCCA GGAGATGGTA
GATGGCATGG CGTTGGTGAG GACGTCGAGT CGTGTTTGCT GGAACTTATA TTTTGAATGG
CTCGATATCC AAAACATAGC TGATCTTCAT GAAAGAAATG TCATATATTA CTTAAATCAC
TTCCCTGGTG ATGGATTAGG GATCGTACTC TATGCCTACG CATTAAGTGA CATATCGCCT
TTCAACAAGA ATGTAATCAT CAATAGTGTC AAAAGTCACG ATTCATTCAC CTCGACCAAA
GAGCAGAAGA CTAGTAAACG TAAAAAGAGA TACGAAGCCG CGACAGAAGT GGAATCAAAT
ACAAAACCAG GCAAAGATAG AGATCCTTAT GACATTAGTC AATTCTACCT ATCTTCAGAG
GAAGTGATAT CTTTCATGTT AAAAGGCTAT GACTGTTCCA AACAGTCAGT GTTGGCCATC
AGAATCATTA TTGAATTTTA TATTCGTTCC CGAAACTTTC CAGAAGCAAC TAAGAAGTGC
AAAGAGGGTA TTCGTCTTCT TGCTGATTTA CAGAGAAGCT TTGGTATCAA TTTGAAGAAT
TCCAGAGAAC ATATCTTGTC CTCTTTAGCT GACATATACA CCCAGCAAGA TACTCCAAAG
AACTTCAACA AAGCCCTTGA ATTGTACAAC AAAATCTTGG ATTTTAGTCC TGATAGCGTT
AATGCCAGAG TTGGCAAGGG TTTGATTTTG ATTGAGAACG GCAAATACGC TGAATCAAAG
ATGTTGTTAG AAGGCGTAGT TCAGAAACAC CAAGACAATG TCGTGGCTCA GGTCGAATAC
TATTGGTGTC TGATCTTGCT AAATGACCAC GAATCTGGAA GAAAAGGCTT GTATTCTGCG
TTGGAAAAGA TCAATGGAGT AGATAATCTA AGTAAAGAAA GGAGGTCTGT TATCCGATGG
AGAATAGCTC AAAGTTACTA CGTTGAAGAC AGCCTGAACG CTCATAATCT TTCAAATGCT
TATTCTGTCT TGATAGAGGC TCTTAAGGAC TCTCGATCAT ATGCCCCAAT ATACACTTTG
TTGGGAATCT TGTTTAAGGA CTACTATTCC GATTCTGCTC GTGCCCAAAG ATGTTTTTAC
AAAGCATTTG AGTTGGACTA CGGGGAAACT ACGGCTGCCA AGTATATCGT AGAAGAATTA
TCTTCTAAGG ATGAGTGGGG TCTAGCTCAA ACCATCTGTG AAAGAATCGT TAACTCTGAG
GATGCCATGG AACTGATTCT GAAATCTGCT AAAGATAACA AGGATAGATC CTGGCCATAT
AGAGTATTAG GTTACTGTGG TCTTAATAGG CAAAGCGATT ATGGCACCGT TGAATGGTTA
CAGAATGCAT TGCGGATTGA TTCGACGGAC TACGAATGTT GGACTGCTTT GGGCGAAGCG
TACCTTAACT GTGGACGACT TGAAGCTGCT GTCAAAGTCT TGCAGTTTTC GTTGTCTCTC
AATGAAGGGG CCTGGGAAAC CAAGTACTTG TTGGGTATTG CTCATTGTTC AATCTTTGAA
TTTGATGAAG GAATCAAGCA CTTAGTAGAA GCTTTGGAAT ATAACCCTGG TCAAGAATGT
ATCTTGAATG CTATCTATGA ATCTTATTTG GAAAATACCC ATTACTTATT GTTTAATGGC
TTTCTGAGAA GAGCGATTCT GTCCAATTTT GAAACTATCA AATATCTTCA ATTGCTGGTA
ATGCAAAATA AAGATTCGCA AAGCTTATGG AAAGCATTGG CAGAATGCTT TCAATTCTAC
TTGACGGTAA GAGAAAAGAT AGGTTCATTC CCAATAGACT TCATGGAGTC CTTATTTGGA
ACAGTCAATT TTGATACCCC AACTAATGAT GTTCTTGCCA AGCTTGAAGA TAAGGAATCC
TCTAACTTAT CCTACAACGT CTCCTTGTTC AATTCTGGAA AACGGGAGGA GGCAATTTGT
AACTTTATGA TCATGAGCTC CAAAGCAGCA GTTCAATTCT TGACCAATAA GCCGAATCGT
TCTGTCAGTG CGGCTGCTTA CTACAACCTT GGATTATCAT ACTCTGAAGC TTTCCAATTG
ACGGATATCG CTGCTTATAG AGACAACGCA ATTATTGTTC TCAAGAAAGC AATTCAATTG
GAAGATACGA ACGCTTCTTT CTGGACAGCT TTGGGTAGTG TGTATGTTAC ATCCAATGTC
AGAATCTCCC AACATTGTTT TATCATGGCC TGTGAAATTG ATGGAAGGGA TGTTATTGTT
TGGACCAACT TGGCTGCTTT GTACTTGTAT GTGGGCGATT ATGAATTGGC AAATGAATGT
TTCTTGAGAG CGCAGGCAGC AGAACCACTA GAAACAAATC CATTGTTGGG TCAAGCTTTG
GCAGCTGATG CTATGGGTGA CGAGAGCTTG GCTGCCAAAA TCTTCAGCCA TGCTTTCTCT
ACCTCTAGAG GAAGGTCACC GTTGGCTTTG GTTTTGTATG GTTTGTCTGT TTTGCAAAGG
AGAATTGACG ATATAGATCC CACCGATTAT GCTGCCTCAC TAGAGTTTAG TCTTGCCAAC
GAAGCACTAT TGACTTACTT GAAGTATGCT CCAGATGACG TGTTTGCTTT AGAAGCTGCA
GCTACCATCG CTGAAAGATG TAAAAGTTAC GATGTTGCTG TTACGGTTGG TGAACGCTTA
TGTACAATCC TTGAAGCTAA GTACGAGGAA ACTGAAGATG AACAGACATT GGTCAAATAC
GCTTCTTCCA AGTCCCAGTT GGCCAGACTC TATCTAGGAA TGCTTGAATA CCAGAAAGCA
CTTGATTGTG CTGAAAATGC TATCGAGTTG ATTGGAGATC TGACTGAGGA CGCTGAATTG
AGCAAGATTG AATTATCATC GAGAATTGTT CTTGGATTGA GTTGGTTCTT TAATGATGAA
TTCGAGCTAG CTCTTAAAGA GCTTAGGTCT ATACTTTCCG ACCACGGTAA CACCAGAAGC
ATTGCTATAC TTGTAGCACA AATACTCTAC GCCTACGGCA GTGAAGAGAC AAAGCTGGCA
GCATTGGACC AGCTCTTTTC GTATATTGAA GAGAATGGTT CTTCGCTTGC AGTAGTATTG
ACGTTGGGAG CCATGTGCGT GGGCGACAAT ATCGAGGAGT ACCTTTTACC AGTCAAGGAG
GAATTGGTTG GTATTCTGTT GGAAGATGTT ATCCGCGATA CACATAGAGA CATTCCTCGA
TTGATCAGCG AAATCAACAA GCGAATCGAC GGTGTTTCAG GCAACAACGA CTATCTTTGG
CAGAGGAATG CCGTTTTGTT CCCATCTGAA TACGAAGTGT GGAAGAAACT CAATAGTACT
ATGGCTGTCA GTGTGGCTGC GTTAGAAAAG TCCAAGGTCA GTGCTTCCCA GGCTAGTGAA
GCACATCTTT TGGGTGGCTC TTTGCGTGAA CTTCAGAGAA GTATGATCCT AGCTCCAAAT
CTGGCTATTG CTTCTCAAGC TTTCCAGAAG ATGTTTGCCT AG
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| Protein sequence | MSSVKKALKL AKSAIDSGDA ELAHEHIQDA LRTDPESYFA YVFLGKAYQL ENDIANANKA
FERATQLEPE NMLAWRGYLQ SVKSESDYAL FFKVVTQLIR LQVDQGFSIA ETIKDIRNYL
AVQKYKKNPV LHEMYLRQLK PGAELAELVG SALGNPVDNL RDLIKLTAKK LEVEVTHKSA
KERVKYGRRL TANQQLKMDN FQWAIYKNTD LESLYEMYLN IGTNDDQRRI FEDDLLNFRY
QLLKVCPEKK ELLHKIQEMV DGMALVRTSS RVCWNLYFEW LDIQNIADLH ERNVIYYLNH
FPGDGLGIVL YAYALSDISP FNKNVIINSV KSHDSFTSTK EQKTSKRKKR YEAATEVESN
TKPGKDRDPY DISQFYLSSE EVISFMLKGY DCSKQSVLAI RIIIEFYIRS RNFPEATKKC
KEGIRLLADL QRSFGINLKN SREHILSSLA DIYTQQDTPK NFNKALELYN KILDFSPDSV
NARVGKGLIL IENGKYAESK MLLEGVVQKH QDNVVAQVEY YWCSILLNDH ESGRKGLYSA
LEKINGVDNL SKERRSVIRW RIAQSYYVED SSNAHNLSNA YSVLIEALKD SRSYAPIYTL
LGILFKDYYS DSARAQRCFY KAFELDYGET TAAKYIVEEL SSKDEWGLAQ TICERIVNSE
DAMESISKSA KDNKDRSWPY RVLGYCGLNR QSDYGTVEWL QNALRIDSTD YECWTALGEA
YLNCGRLEAA VKVLQFSLSL NEGAWETKYL LGIAHCSIFE FDEGIKHLVE ALEYNPGQEC
ILNAIYESYL ENTHYLLFNG FSRRAISSNF ETIKYLQLSV MQNKDSQSLW KALAECFQFY
LTVREKIGSF PIDFMESLFG TVNFDTPTND VLAKLEDKES SNLSYNVSLF NSGKREEAIC
NFMIMSSKAA VQFLTNKPNR SVSAAAYYNL GLSYSEAFQL TDIAAYRDNA IIVLKKAIQL
EDTNASFWTA LGSVYVTSNV RISQHCFIMA CEIDGRDVIV WTNLAALYLY VGDYELANEC
FLRAQAAEPL ETNPLLGQAL AADAMGDESL AAKIFSHAFS TSRGRSPLAL VLYGLSVLQR
RIDDIDPTDY AASLEFSLAN EALLTYLKYA PDDVFALEAA ATIAERCKSY DVAVTVGERL
CTILEAKYEE TEDEQTLVKY ASSKSQLARL YLGMLEYQKA LDCAENAIEL IGDSTEDAEL
SKIELSSRIV LGLSWFFNDE FELALKELRS ILSDHGNTRS IAILVAQILY AYGSEETKSA
ALDQLFSYIE ENGSSLAVVL TLGAMCVGDN IEEYLLPVKE ELVGISLEDV IRDTHRDIPR
LISEINKRID GVSGNNDYLW QRNAVLFPSE YEVWKKLNST MAVSVAALEK SKVSASQASE
AHLLGGSLRE LQRSMILAPN SAIASQAFQK MFA
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