| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_4391 |
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| Symbol | ALS1 |
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| ID | 4836912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 313437 |
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| End bp | 314849 |
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| Gene Length | 1413 bp |
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| Protein Length | 471 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640388227 |
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| Product | Agglutinin-like protein 1 precursor |
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| Protein accession | XP_001382823 |
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| Protein GI | 150864119 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.065918 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATGCTTA GAACAATAAT TTTTCTTTTC TTTTACCTGA TTGTAAGAGC TGCTGAAATA
ACTGGTGTAT TCACTAGTTT TGACTCTCTC GTTTTCCAGA ATGGTGGAAC CTATCCTTAT
GAAGCACCTG CAAACCCTAG CTGGATTGCT ACCTTAAGCT GGGCAATGGA TGGCAATGTA
GTTGCTCCTG GAGACACATT TACTTTACAT ATGCCATGCA CTTTTAAGCT TACAACCGAT
AATACAATCA TTCTAGGAGC AGAAGGTACG ACATACGCTA CATGTCTGCA TTTTTCAGGA
GAAATTATTG TTCCTTATTC TGAATTGTAT TGTACAATTA CAGATTCATT ACTACCTGGT
ATGACAGTAG AAGGTTCCAC TTACTTCCCT GTTGTATTCA ATACTGGCGG AAGTGCATTG
GCCAGCGATT TGGAAGACTC TACATGTTTC ACGAATGGGG AGAACACTGT CTCCTTCTAC
GATGGAGATA CACAACTTTC CACCAGTGTT GTTTTCGAGG CAGGGCCACC AAGTGCCAAT
ATAAATCCAG ACATTGTTAT ATTTAGAGCT AGAGTGCTTC CTCAACTTAA TAGCAGCCAA
CATTATGCTG CCATTGGTTG GTGTCCTAAT GGTTACACCT CGGGTACCTT GGGGTTTACT
TTCACTGGTG GAACTCTTGA TTGTGATTCA GTCCATGCCT CAATTACCAA CCAGTTGAAT
GACTTCCATT ATCCAACCAA TGCCGACCCC AATTTTCTGT ATACTTTCAC TTGTTCACCT
ACATCCTATC AGATCAATTT TGAAAATATT CCAGCTGGAT ATAGACCATT TATCGATGGT
CTTACCAGGC CATCAGGCCC CGCTCTTTCT GTCTTTTATA CCAATCGCTA TCTATGTGCT
GATGAGACGA CATTTAGACA GCAAAATCTT AATGTAAATT GGGGTGAATA TGCAGATGGT
CCGACTAGTG GTAACGGCAA TGTCATTGTG GTCACAACTT CTACATACAG TGGTTCACAT
ACCCAGATAT CCACTGCCAC AGGCGAATCA ACGAACACTA TTATTGTTTA TGTACCTACT
CCAACAGTTA CAATAACAGA GACATGGACT GGGCGCGAAA CAAGCACGAC CACTGTATTT
CCAACATCAG AAGGAGGTAC TGTAATAGTT ATTATCGACT TACCAACGGA TCCTCCACCT
AACCCAACCA CCACTATCAC ATCCGTATGG ACAGGTACTG ATACTACTAC AGTCACAGTA
ACTGACACAG AAGGAGGAAC TGATACAGTA ATTGTTCAAG TTCCTGCAAA CCCAACCACC
ACTATCACAT CTGTCTGGAC TGGAACTGAT ACTACTACAA TTACGGTGAC TGACACAGAA
GGAGGCACCG ATACTGTCAT TGTTCAAGTT CCT
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| Protein sequence | VMLRTIIFLF FYSIVRAAEI TGVFTSFDSL VFQNGGTYPY EAPANPSWIA TLSWAMDGNV
VAPGDTFTLH MPCTFKLTTD NTIILGAEGT TYATCSHFSG EIIVPYSELY CTITDSLLPG
MTVEGSTYFP VVFNTGGSAL ASDLEDSTCF TNGENTVSFY DGDTQLSTSV VFEAGPPSAN
INPDIVIFRA RVLPQLNSSQ HYAAIGWCPN GYTSGTLGFT FTGGTLDCDS VHASITNQLN
DFHYPTNADP NFSYTFTCSP TSYQINFENI PAGYRPFIDG LTRPSGPALS VFYTNRYLCA
DETTFRQQNL NVNWGEYADG PTSGNGNVIV VTTSTYSGSH TQISTATGES TNTIIVYVPT
PTVTITETWT GRETSTTTVF PTSEGGTVIV IIDLPTDPPP NPTTTITSVW TGTDTTTVTV
TDTEGGTDTV IVQVPANPTT TITSVWTGTD TTTITVTDTE GGTDTVIVQV P
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