Gene PICST_43720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_43720 
SymbolOYE2.2 
ID4837887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1822871 
End bp1824085 
Gene Length1215 bp 
Protein Length404 aa 
Translation table12 
GC content43% 
IMG OID640389202 
ProductNAPDH dehydrogenase (old yellow enzyme) 
Protein accessionXP_001383638 
Protein GI126134227 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTA CCTCTTTGAA GTCCACCAAC CTTTTTAAGC CAATTAAGGT CGGCTCTGTC 
ACCTTGCAAA ACAGAGTCAC CCATTTGCCT ACTACAAGAA CCAGAGCCTT TGGTGATCAC
ACTGCCACGG ACTTGCAACT TATTTACTAC GAAGACAGAT CTTCATCGCC TGGCACTCTT
TTGGTCACGG AAGCCACACT TATCTCTATG AACCAAGGTC TTTATCCCAA TGTTCCAGGA
ATTTGGAACA AGGACCAAGT CAAGTCGTGG AAGAAGATCA CCGATGCTGT CCACAAGAAG
AGAGGTTTCA TTTCTGTACA GTTGTGGGCT GTTGGTCGTG TTGGTTTTCC TGATTTATTG
AAGGCTGAAG GTTTACCATT GACTTCTCCT TCTGCCTTGT ATGAATCAGA AAAGTCTAAG
GAAGCGGCTG AAGCTGTTGA AAACCCTGTC AGGATGTTGA CCGAGGACGA GATCAAGGAT
ATTATCTACA ACCAGTATAC CAACGCTGCT AAAAATGCCA TTGAAGCCGG ATTTGATTTC
CTCGAAATCC ACGCTGCCAA CGGTTTCTTA GTGGAACAGT TCATTAACCC AAGTTCCAAC
ACAAGAACCG ACAAGTACGG AGGCTCCATT GAAAATAGAG CCAGATTTGC CTTGGAATTG
GTTGACCACT TGATCTCTGT GGTTGGTGCT GACAAGTTGG CTATTAGGAT TTCTCCTTTC
AACAATTTCA AAGGTATGTT GGCTGAGAAC GAAGTAATTC ACCCTATTGC TACCTTTGGT
TATATTGTTT CTGAATTACA GAGAAGAGCC GATAAAGGTA ATGAGTTGGC CTATATCAGC
GTTGTCGATG GTCGTTACAA CTCAGATGGA ACCGAAGCTG TCCTTAACAC TAAATTCATT
GACCAGATCT GGAAGGGTGT CATTTTGAGA GGGGCAAAGT ATACTCATGA CTACAAAAAG
AACTGGGAGA CTGTCGCTAG GGATGTAGAC CATGACAATC GTACCTTGAT TGGTTTCGGA
AGAAACTTTA TTGCTAACCC TGACTTGGTT TCCAGATTGG AAAATGGCCT TGAATTGAAT
GCTTATGACA GAGCGACCTT CTATAAGAAT TACAATAACG GTTATAACAC TTACCAATTC
TTTGGATCCT CTGAAGAGGT GGATGCAGAA GCTGAAGCCA AAGTTCTACC TAAGTCGTTA
GTCCAAGATT CTTAA
 
Protein sequence
MTATSLKSTN LFKPIKVGSV TLQNRVTHLP TTRTRAFGDH TATDLQLIYY EDRSSSPGTL 
LVTEATLISM NQGLYPNVPG IWNKDQVKSW KKITDAVHKK RGFISVQLWA VGRVGFPDLL
KAEGLPLTSP SALYESEKSK EAAEAVENPV RMLTEDEIKD IIYNQYTNAA KNAIEAGFDF
LEIHAANGFL VEQFINPSSN TRTDKYGGSI ENRARFALEL VDHLISVVGA DKLAIRISPF
NNFKGMLAEN EVIHPIATFG YIVSELQRRA DKGNELAYIS VVDGRYNSDG TEAVLNTKFI
DQIWKGVILR GAKYTHDYKK NWETVARDVD HDNRTLIGFG RNFIANPDLV SRLENGLELN
AYDRATFYKN YNNGYNTYQF FGSSEEVDAE AEAKVLPKSL VQDS