Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_43552 |
Symbol | |
ID | 4837759 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1748361 |
End bp | 1749347 |
Gene Length | 987 bp |
Protein Length | 282 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640389074 |
Product | predicted protein |
Protein accession | XP_001383620 |
Protein GI | 150864685 |
COG category | [S] Function unknown |
COG ID | [COG5135] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCCAGT TCCATTACAT GGCTCCATGG GTGCCTGGTT TCACTCACGC AGTGGAAGCC GAGTTGATTG CATCCGAGAA CAAGCCGCCG TTCACTCCGT TCCAGTTGGC TACCATCGAT AGCAAGACCG GTTTCCCTAA GAACAGAACT CTCGTGTACA GAGGCTTTCT CTTTGACGAC AAGTCGAACA GCACATTGAC TTTCACTACC GATAAGCGGA TGGATAAATA CGACGAATTA CTCCACAACG ACCGTTTTGA GGCTGTATTC TATTTTGGCA GAACTAAAAA GCAGTTCCGG TTCAGTGGCA GAGCCCGCAT CATCGACGAT GCCCATAGAC CCAGTATCGA CTTGGCTTCT ATTCAGCCCA GTACACTTAT CGAAAATAAT CACAAGAAAT CGCTTAAAAG GGCAAAAGAA TATGACAACT CCGACTCGGA GTACTTAGAG TCTGAAAACG ACGAGGAACA TCATCACCAT CATCACCATC ACCAACATCA CCAACATCAC CAACATAACC AAACCAACAA TAATAATACT ATCAAACAAC ATATCTATAA TCCCCAGAGC GTGCCCATAT CATGTAGTTT GTTGTCGCCT TCGTTGTTGT CGCAGTTCAA CAACGACTCC ACCAGCGATT TGGCGTATCT GACGTTGAAC GAATTATCAC ATTTGCTGTA TATCCCTCCT ACCGATCAGG AATGGAGTGA CGAAATCGAG CGTCAGTGGA ATGGCTTATC CAAGGGATTG AAGAAGTCGT TCAGAAAGCC TCTGCCATTG ACTCCGTTGA CTGACGAACA CGTCAAGCTT ATGGACTCTA TCAACAGAGG TGTAGATGGC AAGAAAGACG ACCATGGTAA AAAGAACTTC GCCGTAGTAG CCATGTTCAT CGACCGTGTT GACTTGGTCG AGCTAGATAA GGACAGACGG TACATCTACG TCAAGGACCC GCACCAATTG TGGAGCGAGG AAGAAGTTTG TCCTTAG
|
Protein sequence | MLQFHYMAPW VPGFTHAVEA ELIASENKPP FTPFQLATID SKTGFPKNRT LVYRGFLFDD KSNSTLTFTT DKRMDKYDEL LHNDRFEAVF YFGRTKKQFR FSGRARIIDD AHRPSIDLAS IQPSTLIENN HKKSLKRAKE YDNSDSEYLD LLSPSLLSQF NNDSTSDLAY STLNELSHLS YIPPTDQEWS DEIERQWNGL SKGLKKSFRK PSPLTPLTDE HVKLMDSINR GVDGKKDDHG KKNFAVVAMF IDRVDLVELD KDRRYIYVKD PHQLWSEEEV CP
|
| |