Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_41452 |
Symbol | BGL2 |
ID | 4837167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 2707875 |
End bp | 2710430 |
Gene Length | 2556 bp |
Protein Length | 851 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640388482 |
Product | beta-glucosidase |
Protein accession | XP_001383273 |
Protein GI | 126133496 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCAA GTGTTAAACA ACCTGTTCCT AAGGAGCTTG ATATCGAGTA CTTGATCGAG CAATTGACCA TTGAAGAAAA GGTCTCTTTG TTGGCCGGTA AGGACTTCTG GCACACCCAG AACATCGACA GATTGAACAT CCCCAGTGTC AGAGTGTCAG ATGGCCCTAA CGGTATCAGA GGTACCAAGT TTTTCAACTC TGTTCCTTCC AACTGTTTCC CATGTGGTAC TGGTTTGGCT GCCACCTTCA ACAAGGAAGT TTTGCTCCAA GCCGGTGAGT TGATGGGTAA GGAAGCGAAG ATGAAGGGAG CCCACGTTAT CTTGGGTCCA ACGTGTAACA TTGTTCGTTC TCCATTGGGA GGAAGAGCGT TCGAATCGTA CTCTGAAGAT CCAGTTTTGT CTGGACATGC TGCTGCCAAT GTTGTCAAGG GTATCCAGAA CCAAAATGTT GTTGCCTGTC TCAAGCATTT CGTTGCCAAT GACCAAGAAC ACGAAAGAAA GGCCGTGGAC GAAATCATGA CAGAAAGAGC TTTGAGAGAA ATCTACTTGA AGCCTTTCCA CATCGCCATG AGAGATGCCT ATCCAAAAGC CTTAATGACT GCTTACAACA AGATCAACGG TGTCCATGTT TCGCAGAACA AGAAGATTTT GCAAGATCTC TTGAGAGGTG AGTGGGGCTA TACAGGTACT GTCATGTCTG ACTGGCACGG TGTCTACTCT ACCAAGGAAT CGTTGGATGC TGGCTTAAAC TTGGAAATGC CTGGTCCAAC TAGATTCAGA CAGCAAGTAC CAACACTTCA TGCCATCCAA ACCAATGAAA TTCACACTGA TGTCATTGAT GACAATGCTC GTGCAATCTT GAGATTGGTC AACGAAAGTT TGAAGGCTGG AATCCCAGAC GATGTCATTG AGTCACCCAA CCCTACTAAA GAAGCATCTG ACTTGTTGAG AAAGGCTGGT GACGAGTCAA TTGTCTTGTT GAAGAACGAA AATAACATCT TGCCATTATC TAAGACTGCT GTCAAGGGCC AAGAGAAAAT TGCAGTTATC GGTCCAAATG CTAAGGCTGC CCAAGATTCT GGTGGTGGAT CTGCTTCGTT AAACGCTGCC TACAAGATCA CTCCATACGA AGGTATCGAG TCCAAAATCA TTGAAGGTGG AAACTCTGTA TCTTTGGATT ACTCCTTAGG TGCTTTTTTG GACAGAAACT TACCCGATGT TGGGAACACT TTGATCAACG AAGAAGGTAA GAAGGGTATC ACTGCCAAGT TCTACAAGCA AGCTCCAGGA GCCGCTGACA GAGAACACTT CGAAACTTTC ACTTTGTCTA CTTCCAAAAT CTTCCTTTCT GACTACAAAA GTAAACACTT GAAACCAGGA CAACTCTTGT TCTACGCTGA TTTCCATGGA ATCTATATTC CCGATGAAAC TGGTGACTAT GAGTTTGGAG CTTCCTGTTT GGGTACTGCC CAACTTTTTG TTGATGACGA ATTGGTTGTT GACAACAAGA CCAAGCAAGT GAAAGGTGAT GCTTTCTTCT TGGGTTTGGG TACCAGAGAA GAAAGAGGTG TCAAGAAATT GGAGAAGGGC AAAAAGTACA ACATCAGAGT TGAGTTTGGT TCTTCGCCTA CTTTCACCTT GAACAAGGCA GCTCTTGAAG GGGGAGGTGT CTTTTTCGGT ATCAGAATGA TTTCTACTGC TGAAGCTGCA ATTGCTAAGG CAGTTGCTGT GGCCAAGGAA GCTGACAAGG TTATCTTGGT TGTTGGTATC TCAAAGGAAT GGGAATCTGA AGGTTTCGAC AGACCTACTA TGGATATCCC AGGTGCTACC AATGAATTAG TGGATGCCAT TACTGCCGTC AACAAGAATG TCATTGTTGT CAACCAGTCG GGCTCTCCTG TGACCCTTCC ATGGATCAAC AAAGTACAGG GTTTTGTCCA AGCCTGGTAC GGTGGTAATG AATTGGGTAA CACCATTGCC GATGTGTTGT TTGGTGACTA CAATCCCTCT GGTAAGTTGT CTATGACTTT CCCTAAGAGA CTTCAAGACA ATCCTTCGTA CTTGAACTTT GCTTCAACAC ATGGGCAAGT ATTATACGGT GAAGATATCT ATGTTGGCTA TAGATACTAC GAGAAGGTCG GTGTTGAACC ATTGTTCCCA TTCGGCTACG GTTTGTCCTA CACTACCTTC GAGCTCAAAG ACTTAGTAGT AGAGTATGAC CAAGAAATTA TCAACGCCAA GGTCAGTGTC GTTAATACTG GTAAGGTGGA TGGTGCTGAA GTTGTTCAAT TGTACGTTTC TCAGGTCAAC CCAAGCATTA ACAGACCAGT GAAAGAATTG AAGGACTTCG GAAAAGTCTT CGTCAAGGCT GGCGAAACCA AGACACTTGA GTTGAGTGTT TCCGTCAAGG AAGCCACTTC ATTCTGGAAC GGGTACAAGA ACAAATGGCA ATCTGAAAAG GGCAAGTATA AAATTTCTGT TGGTAACAGT TCTGACAATA TCACTCTCGA AGACGAGTTT GAAACCTCCA AGACTTACTT CTGGTTAGGT TTATAG
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Protein sequence | MTPSVKQPVP KELDIEYLIE QLTIEEKVSL LAGKDFWHTQ NIDRLNIPSV RVSDGPNGIR GTKFFNSVPS NCFPCGTGLA ATFNKEVLLQ AGELMGKEAK MKGAHVILGP TCNIVRSPLG GRAFESYSED PVLSGHAAAN VVKGIQNQNV VACLKHFVAN DQEHERKAVD EIMTERALRE IYLKPFHIAM RDAYPKALMT AYNKINGVHV SQNKKILQDL LRGEWGYTGT VMSDWHGVYS TKESLDAGLN LEMPGPTRFR QQVPTLHAIQ TNEIHTDVID DNARAILRLV NESLKAGIPD DVIESPNPTK EASDLLRKAG DESIVLLKNE NNILPLSKTA VKGQEKIAVI GPNAKAAQDS GGGSASLNAA YKITPYEGIE SKIIEGGNSV SLDYSLGAFL DRNLPDVGNT LINEEGKKGI TAKFYKQAPG AADREHFETF TLSTSKIFLS DYKSKHLKPG QLLFYADFHG IYIPDETGDY EFGASCLGTA QLFVDDELVV DNKTKQVKGD AFFLGLGTRE ERGVKKLEKG KKYNIRVEFG SSPTFTLNKA ALEGGGVFFG IRMISTAEAA IAKAVAVAKE ADKVILVVGI SKEWESEGFD RPTMDIPGAT NELVDAITAV NKNVIVVNQS GSPVTLPWIN KVQGFVQAWY GGNELGNTIA DVLFGDYNPS GKLSMTFPKR LQDNPSYLNF ASTHGQVLYG EDIYVGYRYY EKVGVEPLFP FGYGLSYTTF ELKDLVVEYD QEIINAKVSV VNTGKVDGAE VVQLYVSQVN PSINRPVKEL KDFGKVFVKA GETKTLELSV SVKEATSFWN GYKNKWQSEK GKYKISVGNS SDNITLEDEF ETSKTYFWLG L
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