Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_40289 |
Symbol | FRE1.2 |
ID | 4837501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 1381659 |
End bp | 1383845 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640388816 |
Product | ferric reductase transmembrane component (Ferric-chelate reductase) |
Protein accession | XP_001383032 |
Protein GI | 150864279 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4097] Predicted ferric reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.753859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCGG GTATCTTCTA CCTCACTATT GGTTCTTTGT TATCTGTAGC TGCTGGAACA GCAGCTCCTT ATGAAAAGTA TGGTGCTCCA AAGAAAGCGA TGTATGCCTG CAATTATCAA CTTTCTTCGA CTGCCACTTG GTGCTCTGCT GATATTGATC AAACAACTTG TTATTGTTCA AACCCTTATG CATTGAGTAG TGTTGCAGGA TGTTACAGTT ATGCCGGTAG AAATACCACC AAGAATTATA AAGTTCTCAT TGAAGCATGC CTGGAAGTTA ATGTCACTCT CACTATGGAT CAATTGGAAC AAGCCTATGT TAACTACACC AAGAATGCCA AATCTCCAGC TGATATTGAA GGTTTCAATG CCACTGAAGT AGTCGAGGTG CCAATTAAGT TACAAGATAA TGTCACTGAT CTTTATATGA GAGCATATGA TGTGTTCTTG GACAACTATG ATTTTTCTCT CTACTATGGA TCTGGCTTAC TTGGATATTG GTGTCTTGTT TTCGTTCTTG CTGCCATTTG CAACTGGTCA AAGATATTAT TTCCTGGCTT ATTTAAGTCA TTAACTGGTC CATTTTCAAC CTTGGTTAGA AAGCATATCA CAATGCCAGC TACCTTCAAC AACAGGAAAA CTCATGAATT TACTTTCTTG AAATTCTTCC AAATTTTGAT TCCTTCGAGA CTCGAAACAT TGATAATTAG TGGATTCGTA ATCCTTACAA TTGCTCTTAG CGCTACAAGA ATTTACTATA TCGAAGGTGA TCCCTTGTTT GAATCGAGGA AGATTGCAAT TCTGCGTTAT ATTGCTGATC GTACCGGAAT TCTTGCAACA AATTTAACCC CTTTGTTGAT TTTATTTGCT GGACGTAATA ACTTCTTGCA ATGGGTCACC AGATGGAATT TTGCAACCTT CATTACCTAC CATAAATGGG TGGCAAGAAT AACTTTCATT TTGGTATTAA TCCACGCCGT TGGCTTTACT ATCGATCTTG GATCATACTA TTCTGAAGAT GTCAAAGATT TGTACTTAAT AATGGGTATT GTTGCCACTG TGGGTGGTGG CATAATTCTC TTCCAAGGTC TTCTTTATTT GAGAAGATCC TGGTACGAGT TTTTCTTGCT CACTCATATT GTGTTGGCTG TACTTTGGAT TGCTGGAGGC TGGTTACATG TTGTTGATTT GGGTTATATA CACTGGTTCT ACGCCGCCGC TGCCGTTTGG GTTTTTGACA GAGCAGTCAG AATTGGAAGA TTAATCGTCT TCGGATTTCC AAGATCAACG GTTTCCTTGT TGGCTGACGA GACTTTAAAG GTTGATATTC CAAAACCAGC ACATTGGAAA TCTGTCCCTG GCGGACACGC CTTTATTCAC TTCTTAAGAC CAAGTTGTTT CTGGCAGTCC CATCCATTTA CATTCACTGA GTCTTATGAA CAGAAGGACA CTATTACTCT CTATTGTAAA GTCAAGGGAG GTGTCACGCA CGGCCTTTAC CAATACCTTG CTACACACCC AGGGAAGACT ACACAAATTA GAGTTGCTGT TGAAGGTCCA TATGGTGAAC CTACCGCAGC ATATAGATAT GACTCTGCTA TATTCATTGC TGGTGGAAAT GGTATTCCAG GTATTTTCTC CGAAGCTGTA AGCATTGCCA GCAGATCTAG AGAAAACACT AAGCAGACCA TTAAGTTGTT TTGGATTGTT AGAGAATACA AATCCCTACT TTGGTTCTAT GATGAACTAC GCCAATTGAA GAATTCCAAG ATTCAAACAA CAATTTTCAT AACTAAACCT GATTCTCAAA GACACTTAGA TGACTTCAAG CAGAAGGACT TTGAAAACTA CAATTCAGAC AAAATCTACA AAGAATCAGA AGAAAAGAAA GATCATACCA GTGTCAAGGT CGAAAGCAAT AGTGAGAACG AAGATGAAGC TAGCTCTACC ACAGATATCA TCAACACAAT TCATGAGGAG CTTGACCATA TCAATTTCAA GATGGGAAGA CCCACAATGG AGGAGCTTGT TGGTGAAGAA ATTAAAGAGT CAACTGGATC TGTTGCTTTC GTTGCATGTG GTCATCCAAT TATGCTTGAC GACCTTCGTT CTTCAGTTGT CAAGAACTTA GACAACAAGG AAAAGAAACG TATTGAATTC TTTGAACAGT TACAAGTATG GGCCTAA
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Protein sequence | MKSGIFYLTI GSLLSVAAGT AAPYEKYGAP KKAMYACNYQ LSSTATWCSA DIDQTTCYCS NPYALSSVAG CYSYAGRNTT KNYKVLIEAC SEVNVTLTMD QLEQAYVNYT KNAKSPADIE GFNATEVVEV PIKLQDNVTD LYMRAYDVFL DNYDFSLYYG SGLLGYWCLV FVLAAICNWS KILFPGLFKS LTGPFSTLVR KHITMPATFN NRKTHEFTFL KFFQILIPSR LETLIISGFV ILTIALSATR IYYIEGDPLF ESRKIAISRY IADRTGILAT NLTPLLILFA GRNNFLQWVT RWNFATFITY HKWVARITFI LVLIHAVGFT IDLGSYYSED VKDLYLIMGI VATVGGGIIL FQGLLYLRRS WYEFFLLTHI VLAVLWIAGG WLHVVDLGYI HWFYAAAAVW VFDRAVRIGR LIVFGFPRST VSLLADETLK VDIPKPAHWK SVPGGHAFIH FLRPSCFWQS HPFTFTESYE QKDTITLYCK VKGGVTHGLY QYLATHPGKT TQIRVAVEGP YGEPTAAYRY DSAIFIAGGN GIPGIFSEAV SIASRSRENT KQTIKLFWIV REYKSLLWFY DELRQLKNSK IQTTIFITKP DSQRHLDDFK QKDFENYNSD KIYKESEEKK DHTSVKVESN SENEDEASST TDIINTIHEE LDHINFKMGR PTMEELVGEE IKESTGSVAF VACGHPIMLD DLRSSVVKNL DNKEKKRIEF FEQLQVWA
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