Gene PICST_40078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_40078 
SymbolTGL2 
ID4851972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009068 
Strand
Start bp3328682 
End bp3329986 
Gene Length1305 bp 
Protein Length435 aa 
Translation table 
GC content41% 
IMG OID640393680 
ProductTriglyceride lipase-cholesterol esterase 
Protein accessionXP_001386960 
Protein GI126276180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.288827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0795149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCAC TAGCGGCGAC TCTCTATACA ATAGGGATAC TATTGTTACA AATCCTACTT 
CAATATGTCC ATTCTTCGTT CTGTTACATT ATAGCGTTTG TTCCTACAAG GAGGAAAACA
GATAAACAGA TTTCTACCAC AGATGGAGCT CCAGAAACTG TGCAAACAAG ACACATTGAC
GCCATTGATA TAGCAGATAT CGTCGCTCCG TTTGGCTACA TCGTCAGAGA GCATGTAGTC
ACTACTGAAG ATGGCTATAT ACTCGTTATT CACAAATTAG AAAAGAAATC GAACCACCTG
AAAAACTCTA AGAAAATCGC CTATTTCCAC CACGGGATGC TCACAAACTC TGAGTTGTTT
GTCTTGGGAG ACGAGAAGAA CAAGACGTTG CCCTTCATTT TGGCAGATCT CGACTACGAC
GTATGGTTGG GAAATAATCG TGGAAATAAG TACTCAAGAA AACACTTGAA GTTATCGGCT
TCAGATGTCA AGTTTTGGGA CTTTTCTTTG GACGAGTTTG CCTACTACGA TATTCCAGCC
ATACTAGACT ATATCAAGTC TCTCTACCGT CCAGAAGATA AAATCACATA TATAGGTTTC
TCCCAAGGTT GTTCCCAGCT TTTTGCATGC TTGAGTTTGC ACCCACATAT CAACAAATAC
TTGAACATGT TCATCGGACT TTCTCCGGCA TTGATACCAC AAAACTTGAG TCATCCTATC
TTCAAGGTCA TCGTCAATCA AACCGCAAAA GATGCCAACT TCTTGTACAA CTTGTTTGGT
AGAAGAGCTA TATTGTCTTC AGTAGCGTTC TGGTCGCATA TCCTCGGGCC ATACTACAAT
AAGGTTGTAG ATGTTTCATT GGTTTACTTA TTTGGCTGGT CAGGCAAGAA CATAAGCAAT
AAGCAGAAAC AGACTGGGTA TCCTCATATG TTTTCCAATC TGTCGGTGAA ATCTCTTATT
CACTGGTTTC AAATCATATA CACGAAGAGA TTCCAGATGT ATGACGAAAC TGAAAGTTTT
GGCCGCACAA AACTCTCAAT GTTGTCTTCA GCTCTGAAGA ACAAGGGCCA CCGTGTCGCT
CCGTTCCCAG TGGCTCATCA TCTTGATGTG CCTATGACAT TATTCTACGG TGATAGTGAT
ATCTTGGTAG ATATAGAACG TACAAAAAGC TTGATCGTCG ACCAAAATGA AAAGATGCAA
ACAAAGCTAG ACGTGGTCCT CTGTCCAGGT TACGAGCATA TGGACACTCT TTGGTCTGAT
AATGTCTACG AAGATGTATT CGCCAAAGTT GTAGCTGTTA TGGAA
 
Protein sequence
MASLAATLYT IGILLLQILL QYVHSSFCYI IAFVPTRRKT DKQISTTDGA PETVQTRHID 
AIDIADIVAP FGYIVREHVV TTEDGYILVI HKLEKKSNHL KNSKKIAYFH HGMLTNSELF
VLGDEKNKTL PFILADLDYD VWLGNNRGNK YSRKHLKLSA SDVKFWDFSL DEFAYYDIPA
ILDYIKSLYR PEDKITYIGF SQGCSQLFAC LSLHPHINKY LNMFIGLSPA LIPQNLSHPI
FKVIVNQTAK DANFLYNLFG RRAILSSVAF WSHILGPYYN KVVDVSLVYL FGWSGKNISN
KQKQTGYPHM FSNLSVKSLI HWFQIIYTKR FQMYDETESF GRTKLSMLSS ALKNKGHRVA
PFPVAHHLDV PMTLFYGDSD ILVDIERTKS LIVDQNEKMQ TKLDVVLCPG YEHMDTLWSD
NVYEDVFAKV VAVME