Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_40078 |
Symbol | TGL2 |
ID | 4851972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009068 |
Strand | + |
Start bp | 3328682 |
End bp | 3329986 |
Gene Length | 1305 bp |
Protein Length | 435 aa |
Translation table | |
GC content | 41% |
IMG OID | 640393680 |
Product | Triglyceride lipase-cholesterol esterase |
Protein accession | XP_001386960 |
Protein GI | 126276180 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.288827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0795149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCAC TAGCGGCGAC TCTCTATACA ATAGGGATAC TATTGTTACA AATCCTACTT CAATATGTCC ATTCTTCGTT CTGTTACATT ATAGCGTTTG TTCCTACAAG GAGGAAAACA GATAAACAGA TTTCTACCAC AGATGGAGCT CCAGAAACTG TGCAAACAAG ACACATTGAC GCCATTGATA TAGCAGATAT CGTCGCTCCG TTTGGCTACA TCGTCAGAGA GCATGTAGTC ACTACTGAAG ATGGCTATAT ACTCGTTATT CACAAATTAG AAAAGAAATC GAACCACCTG AAAAACTCTA AGAAAATCGC CTATTTCCAC CACGGGATGC TCACAAACTC TGAGTTGTTT GTCTTGGGAG ACGAGAAGAA CAAGACGTTG CCCTTCATTT TGGCAGATCT CGACTACGAC GTATGGTTGG GAAATAATCG TGGAAATAAG TACTCAAGAA AACACTTGAA GTTATCGGCT TCAGATGTCA AGTTTTGGGA CTTTTCTTTG GACGAGTTTG CCTACTACGA TATTCCAGCC ATACTAGACT ATATCAAGTC TCTCTACCGT CCAGAAGATA AAATCACATA TATAGGTTTC TCCCAAGGTT GTTCCCAGCT TTTTGCATGC TTGAGTTTGC ACCCACATAT CAACAAATAC TTGAACATGT TCATCGGACT TTCTCCGGCA TTGATACCAC AAAACTTGAG TCATCCTATC TTCAAGGTCA TCGTCAATCA AACCGCAAAA GATGCCAACT TCTTGTACAA CTTGTTTGGT AGAAGAGCTA TATTGTCTTC AGTAGCGTTC TGGTCGCATA TCCTCGGGCC ATACTACAAT AAGGTTGTAG ATGTTTCATT GGTTTACTTA TTTGGCTGGT CAGGCAAGAA CATAAGCAAT AAGCAGAAAC AGACTGGGTA TCCTCATATG TTTTCCAATC TGTCGGTGAA ATCTCTTATT CACTGGTTTC AAATCATATA CACGAAGAGA TTCCAGATGT ATGACGAAAC TGAAAGTTTT GGCCGCACAA AACTCTCAAT GTTGTCTTCA GCTCTGAAGA ACAAGGGCCA CCGTGTCGCT CCGTTCCCAG TGGCTCATCA TCTTGATGTG CCTATGACAT TATTCTACGG TGATAGTGAT ATCTTGGTAG ATATAGAACG TACAAAAAGC TTGATCGTCG ACCAAAATGA AAAGATGCAA ACAAAGCTAG ACGTGGTCCT CTGTCCAGGT TACGAGCATA TGGACACTCT TTGGTCTGAT AATGTCTACG AAGATGTATT CGCCAAAGTT GTAGCTGTTA TGGAA
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Protein sequence | MASLAATLYT IGILLLQILL QYVHSSFCYI IAFVPTRRKT DKQISTTDGA PETVQTRHID AIDIADIVAP FGYIVREHVV TTEDGYILVI HKLEKKSNHL KNSKKIAYFH HGMLTNSELF VLGDEKNKTL PFILADLDYD VWLGNNRGNK YSRKHLKLSA SDVKFWDFSL DEFAYYDIPA ILDYIKSLYR PEDKITYIGF SQGCSQLFAC LSLHPHINKY LNMFIGLSPA LIPQNLSHPI FKVIVNQTAK DANFLYNLFG RRAILSSVAF WSHILGPYYN KVVDVSLVYL FGWSGKNISN KQKQTGYPHM FSNLSVKSLI HWFQIIYTKR FQMYDETESF GRTKLSMLSS ALKNKGHRVA PFPVAHHLDV PMTLFYGDSD ILVDIERTKS LIVDQNEKMQ TKLDVVLCPG YEHMDTLWSD NVYEDVFAKV VAVME
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